Pre_GI: BLASTN Hits

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Query: NC_009664:4423829 Kineococcus radiotolerans SRS30216, complete genome

Start: 4423829, End: 4686013, Length: 262185

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009664:4696961*4696961475841661456Kineococcus radiotolerans SRS30216, complete genome02559BLASTN svgBLASTP svg
NC_009664:4225325*4225325424525319929Kineococcus radiotolerans SRS30216, complete genome01637BLASTN svgBLASTP svg
NC_009664:4347718*4347718437438326666Kineococcus radiotolerans SRS30216, complete genome0741BLASTN svgBLASTP svg
NC_003888:54438325443832546459920768Streptomyces coelicolor A3(2), complete genome6e-90343BLASTN svgBLASTP svg
NC_009664:43777774377777440126323487Kineococcus radiotolerans SRS30216, complete genome2e-89341BLASTN svgBLASTP svg
NC_009664:570768*57076859843127664Kineococcus radiotolerans SRS30216, complete genome1e-53222BLASTN svgBLASTP svg
NC_003155:36550036550038509919600Streptomyces avermitilis MA-4680, complete genome3e-36165BLASTN svgBLASTP svg
NC_003155:32097932097933918518207Streptomyces avermitilis MA-4680, complete genome3e-36165BLASTN svgBLASTP svg
NC_013521:10793710793712943721501Sanguibacter keddieii DSM 10542, complete genome3e-30145BLASTN svgBLASTP svg
NC_021177:23096152309615233757227958Streptomyces fulvissimus DSM 40593, complete genome2e-28139BLASTN svgBLASTP svg
NC_013093:1909305*1909305193716827864Actinosynnema mirum DSM 43827, complete genome3e-27135BLASTN svgBLASTP svg
NC_013169:19414101941410196745126042Kytococcus sedentarius DSM 20547, complete genome6e-25127BLASTN svgBLASTP svg
NC_009480:31412314127854247131Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete6e-25127BLASTN svgBLASTP svg
NC_003155:45920004592000463614444145Streptomyces avermitilis MA-4680, complete genome6e-25127BLASTN svgBLASTP svg
NC_015514:33071993307199334464737449Cellulomonas fimi ATCC 484 chromosome, complete genome2e-24125BLASTN svgBLASTP svg
NC_013169:24238632423863245464230780Kytococcus sedentarius DSM 20547, complete genome2e-24125BLASTN svgBLASTP svg
NC_003888:21174821174823351821771Streptomyces coelicolor A3(2), complete genome2e-24125BLASTN svgBLASTP svg
NC_010407:17752271775227180054825322Clavibacter michiganensis subsp. sepedonicus chromosome, complete1e-23123BLASTN svgBLASTP svg
NC_008595:51689415168941521359944659Mycobacterium avium 104, complete genome2e-22119BLASTN svgBLASTP svg
NC_013169:1845735*1845735186893023196Kytococcus sedentarius DSM 20547, complete genome6e-22117BLASTN svgBLASTP svg
NC_008271:14084614084616654625701Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence2e-21115BLASTN svgBLASTP svg
NC_013235:17615391761539178059919061Nakamurella multipartita DSM 44233, complete genome9e-21113BLASTN svgBLASTP svg
NC_013729:4835452*4835452485815922708Kribbella flavida DSM 17836, complete genome1e-19109BLASTN svgBLASTP svg
NC_009921:36668983666898374071873821Frankia sp. EAN1pec, complete genome1e-19109BLASTN svgBLASTP svg
NC_007333:32445723244572326976825197Thermobifida fusca YX, complete genome6e-19107BLASTN svgBLASTP svg
NC_013521:2193203*2193203221998826786Sanguibacter keddieii DSM 10542, complete genome6e-19107BLASTN svgBLASTP svg
NC_014168:1294000*1294000132534231343Segniliparus rotundus DSM 44985 chromosome, complete genome6e-19107BLASTN svgBLASTP svg
NC_013174:373726*37372639441720692Jonesia denitrificans DSM 20603, complete genome2e-18105BLASTN svgBLASTP svg
NC_009937:412302*41230243181319512Azorhizobium caulinodans ORS 571, complete genome2e-18105BLASTN svgBLASTP svg
NC_015859:31265003126500314878722288Corynebacterium variabile DSM 44702 chromosome, complete genome9e-18103BLASTN svgBLASTP svg
NC_013093:31578973157897318209324197Actinosynnema mirum DSM 43827, complete genome9e-18103BLASTN svgBLASTP svg
NC_008146:33494153349415338101531601Mycobacterium sp. MCS, complete genome1e-1699.6BLASTN svgBLASTP svg
NC_008705:33776973377697340929731601Mycobacterium sp. KMS, complete genome1e-1699.6BLASTN svgBLASTP svg
NC_009077:33232913323291335489131601Mycobacterium sp. JLS, complete genome1e-1699.6BLASTN svgBLASTP svg
NC_009937:5033152*5033152505948226331Azorhizobium caulinodans ORS 571, complete genome1e-1699.6BLASTN svgBLASTP svg
NC_015514:3877810*3877810390211124302Cellulomonas fimi ATCC 484 chromosome, complete genome1e-1699.6BLASTN svgBLASTP svg
NC_019673:20513632051363214091689554Saccharothrix espanaensis DSM 44229 complete genome1e-1699.6BLASTN svgBLASTP svg
NC_014210:16259541625954164519219239Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-1595.6BLASTN svgBLASTP svg
NC_014151:40213944021394406852347130Cellulomonas flavigena DSM 20109 chromosome, complete genome2e-1595.6BLASTN svgBLASTP svg
NC_009480:996409964013380134162Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete9e-1593.7BLASTN svgBLASTP svg
NC_008596:13020001302000135784455845Mycobacterium smegmatis str. MC2 155, complete genome9e-1593.7BLASTN svgBLASTP svg
NC_015514:18177318177320534923577Cellulomonas fimi ATCC 484 chromosome, complete genome3e-1491.7BLASTN svgBLASTP svg
NC_015671:13989213989216047420583Cellvibrio gilvus ATCC 13127 chromosome, complete genome3e-1491.7BLASTN svgBLASTP svg
NC_015671:25580825580830092445117Cellvibrio gilvus ATCC 13127 chromosome, complete genome3e-1491.7BLASTN svgBLASTP svg
NC_015671:557720*55772057761419895Cellvibrio gilvus ATCC 13127 chromosome, complete genome3e-1491.7BLASTN svgBLASTP svg
NC_015588:2200517*2200517222724526729Isoptericola variabilis 225 chromosome, complete genome1e-1389.7BLASTN svgBLASTP svg
NC_014151:36119563611956366328251327Cellulomonas flavigena DSM 20109 chromosome, complete genome1e-1389.7BLASTN svgBLASTP svg
NC_011386:1727203*1727203175090123699Oligotropha carboxidovorans OM5, complete genome1e-1389.7BLASTN svgBLASTP svg
NC_007777:12960001296000131759921600Frankia sp. CcI3, complete genome1e-1389.7BLASTN svgBLASTP svg
NC_008278:5012000*5012000505245140452Frankia alni ACN14a, complete genome5e-1387.7BLASTN svgBLASTP svg
NC_008726:11425001142500117062228123Mycobacterium vanbaalenii PYR-1, complete genome5e-1387.7BLASTN svgBLASTP svg
NC_008726:63359616335961637742441464Mycobacterium vanbaalenii PYR-1, complete genome5e-1387.7BLASTN svgBLASTP svg
NC_015671:30935963093596311775724162Cellvibrio gilvus ATCC 13127 chromosome, complete genome5e-1387.7BLASTN svgBLASTP svg
NC_015434:666692*66669270459937908Verrucosispora maris AB-18-032 chromosome, complete genome2e-1285.7BLASTN svgBLASTP svg
NC_015434:24600532460053249159931547Verrucosispora maris AB-18-032 chromosome, complete genome2e-1285.7BLASTN svgBLASTP svg
NC_013172:606387*60638762543019044Brachybacterium faecium DSM 4810, complete genome8e-1283.8BLASTN svgBLASTP svg
NC_014158:14793131479313150261123299Tsukamurella paurometabola DSM 20162 chromosome, complete genome8e-1283.8BLASTN svgBLASTP svg
NC_014158:23373323373332771193979Tsukamurella paurometabola DSM 20162 chromosome, complete genome8e-1283.8BLASTN svgBLASTP svg
NC_016026:21705002170500219248521986Micavibrio aeruginosavorus ARL-13 chromosome, complete genome8e-1283.8BLASTN svgBLASTP svg
NC_011881:111759917599Arthrobacter chlorophenolicus A6 plasmid pACHL02, complete3e-1181.8BLASTN svgBLASTP svg
NC_014391:34456723445672346889423223Micromonospora aurantiaca ATCC 27029 chromosome, complete genome3e-1181.8BLASTN svgBLASTP svg
NC_015514:39116553911655393796226308Cellulomonas fimi ATCC 484 chromosome, complete genome3e-1181.8BLASTN svgBLASTP svg
NC_015953:40455004045500406559920100Streptomyces sp. SirexAA-E chromosome, complete genome3e-1181.8BLASTN svgBLASTP svg
NC_020209:45495634549563457659927037Pseudomonas poae RE*1-1-14, complete genome3e-1181.8BLASTN svgBLASTP svg
NC_003888:7866148*7866148789016824021Streptomyces coelicolor A3(2), complete genome1e-1079.8BLASTN svgBLASTP svg
NC_007778:1053462*1053462107959926138Rhodopseudomonas palustris HaA2, complete genome1e-1079.8BLASTN svgBLASTP svg
NC_009092:43376174337617437380536189Shewanella loihica PV-4, complete genome1e-1079.8BLASTN svgBLASTP svg
NC_009439:79449879449881473720240Pseudomonas mendocina ymp, complete genome1e-1079.8BLASTN svgBLASTP svg
NC_012803:1094679*1094679111581321135Micrococcus luteus NCTC 2665, complete genome1e-1079.8BLASTN svgBLASTP svg
NC_014318:63953926395392646309967708Amycolatopsis mediterranei U32 chromosome, complete genome1e-1079.8BLASTN svgBLASTP svg
NC_015859:16315731631573165925327681Corynebacterium variabile DSM 44702 chromosome, complete genome1e-1079.8BLASTN svgBLASTP svg
NC_021064:1789980*1789980181232622347Propionibacterium avidum 44067, complete genome5e-1077.8BLASTN svgBLASTP svg
NC_015953:47469834746983477386726885Streptomyces sp. SirexAA-E chromosome, complete genome5e-1077.8BLASTN svgBLASTP svg
NC_014814:4809607*4809607483377924173Mycobacterium sp. Spyr1 chromosome, complete genome5e-1077.8BLASTN svgBLASTP svg
NC_014814:38920003892000392242630427Mycobacterium sp. Spyr1 chromosome, complete genome5e-1077.8BLASTN svgBLASTP svg
NC_003888:40312994031299405409922801Streptomyces coelicolor A3(2), complete genome2e-0975.8BLASTN svgBLASTP svg
NC_008596:41529164152916417912726212Mycobacterium smegmatis str. MC2 155, complete genome2e-0975.8BLASTN svgBLASTP svg
NC_015671:1678088*1678088170223524148Cellvibrio gilvus ATCC 13127 chromosome, complete genome2e-0975.8BLASTN svgBLASTP svg
NC_018681:867230*86723090173034501Nocardia brasiliensis ATCC 700358 chromosome, complete genome2e-0975.8BLASTN svgBLASTP svg
NC_018750:43330644333064436046827405Streptomyces venezuelae ATCC 10712, complete genome2e-0975.8BLASTN svgBLASTP svg
NC_004578:21859072185907220851022604Pseudomonas syringae pv. tomato str. DC3000, complete genome8e-0973.8BLASTN svgBLASTP svg
NC_005773:5310339*5310339533285822520Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-0973.8BLASTN svgBLASTP svg
NC_007005:40623114062311408347221162Pseudomonas syringae pv. syringae B728a, complete genome8e-0973.8BLASTN svgBLASTP svg
NC_009480:1261961*1261961128733125371Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete8e-0973.8BLASTN svgBLASTP svg
NC_009937:311242*31124233077419533Azorhizobium caulinodans ORS 571, complete genome8e-0973.8BLASTN svgBLASTP svg
NC_010617:1467000*1467000148518718188Kocuria rhizophila DC2201, complete genome8e-0973.8BLASTN svgBLASTP svg
NC_013441:12214721221472124479723326Gordonia bronchialis DSM 43247, complete genome8e-0973.8BLASTN svgBLASTP svg
NC_013441:27614592761459278449623038Gordonia bronchialis DSM 43247, complete genome8e-0973.8BLASTN svgBLASTP svg
NC_013441:28421342842134286273320600Gordonia bronchialis DSM 43247, complete genome8e-0973.8BLASTN svgBLASTP svg
NC_018583:953889538813461139224Gordonia sp. KTR9 plasmid pGKT3, complete sequence8e-0973.8BLASTN svgBLASTP svg
NC_015675:2247960*2247960227609928140Mesorhizobium opportunistum WSM2075 chromosome, complete genome8e-0973.8BLASTN svgBLASTP svg
NC_013855:558831*55883158109922269Azospirillum sp. B510 plasmid pAB510a, complete sequence8e-0973.8BLASTN svgBLASTP svg
NC_013851:31669693166969319361626648Allochromatium vinosum DSM 180 chromosome, complete genome8e-0973.8BLASTN svgBLASTP svg
NC_013739:55359455535945556853032586Conexibacter woesei DSM 14684, complete genome8e-0973.8BLASTN svgBLASTP svg
NC_013441:382597*38259742422241626Gordonia bronchialis DSM 43247, complete genome8e-0973.8BLASTN svgBLASTP svg
NC_006087:76508176508178509920019Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-0871.9BLASTN svgBLASTP svg
NC_007426:1489677*1489677151433924663Natronomonas pharaonis DSM 2160, complete genome3e-0871.9BLASTN svgBLASTP svg
NC_008570:23650023650025959923100Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-0871.9BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome3e-0871.9BLASTN svgBLASTP svg
NC_009921:52200052200056210240103Frankia sp. EAN1pec, complete genome3e-0871.9BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome3e-0871.9BLASTN svgBLASTP svg
NC_010545:2229125*2229125225385924735Corynebacterium urealyticum DSM 7109, complete genome1e-0769.9BLASTN svgBLASTP svg
NC_012808:39729833972983399542222440Methylobacterium extorquens AM1, complete genome1e-0769.9BLASTN svgBLASTP svg
NC_013093:24715742471574251123439661Actinosynnema mirum DSM 43827, complete genome1e-0769.9BLASTN svgBLASTP svg
NC_013235:593289*59328961584722559Nakamurella multipartita DSM 44233, complete genome1e-0769.9BLASTN svgBLASTP svg
NC_002939:80579480579482823022437Geobacter sulfurreducens PCA, complete genome5e-0767.9BLASTN svgBLASTP svg
NC_005773:38514333851433386927817846Pseudomonas syringae pv. phaseolicola 1448A, complete genome5e-0767.9BLASTN svgBLASTP svg
NC_006361:31320003132000316145129452Nocardia farcinica IFM 10152, complete genome5e-0767.9BLASTN svgBLASTP svg
NC_007492:20357612035761205955323793Pseudomonas fluorescens PfO-1, complete genome5e-0767.9BLASTN svgBLASTP svg
NC_008435:39151103915110393809922990Rhodopseudomonas palustris BisA53, complete genome5e-0767.9BLASTN svgBLASTP svg
NC_014210:14403614403616380119766Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,5e-0767.9BLASTN svgBLASTP svg
NC_014817:1063173*1063173108629123119Asticcacaulis excentricus CB 48 chromosome 2, complete sequence5e-0767.9BLASTN svgBLASTP svg
NC_014910:42072274207227422797420748Alicycliphilus denitrificans BC chromosome, complete genome5e-0767.9BLASTN svgBLASTP svg
NC_015859:33464733346473337186825396Corynebacterium variabile DSM 44702 chromosome, complete genome5e-0767.9BLASTN svgBLASTP svg
NC_015957:33421693342169336097518807Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-0767.9BLASTN svgBLASTP svg
NC_015957:72498737249873727238122509Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-0767.9BLASTN svgBLASTP svg
NC_005296:5238882*5238882526489126010Rhodopseudomonas palustris CGA009, complete genome2e-0665.9BLASTN svgBLASTP svg
NC_008570:3083850*3083850310907525226Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-0665.9BLASTN svgBLASTP svg
NC_010505:55254615525461557227846818Methylobacterium radiotolerans JCM 2831, complete genome2e-0665.9BLASTN svgBLASTP svg
NC_011004:5520771*5520771554678126011Rhodopseudomonas palustris TIE-1, complete genome2e-0665.9BLASTN svgBLASTP svg
NC_013510:12954391295439131735721919Thermomonospora curvata DSM 43183, complete genome2e-0665.9BLASTN svgBLASTP svg
NC_013858:47729847729850922131924Azospirillum sp. B510 plasmid pAB510d, complete sequence2e-0665.9BLASTN svgBLASTP svg
NC_008541:20632182063218208405920842Arthrobacter sp. FB24 chromosome 1, complete sequence8e-0663.9BLASTN svgBLASTP svg
NC_009664:10718107182939618679Kineococcus radiotolerans SRS30216, complete genome8e-0663.9BLASTN svgBLASTP svg
NC_011883:2680380*2680380271559935220Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,8e-0663.9BLASTN svgBLASTP svg
NC_014217:45505444550544458915738614Starkeya novella DSM 506 chromosome, complete genome8e-0663.9BLASTN svgBLASTP svg
NC_014391:4617688*4617688463728919602Micromonospora aurantiaca ATCC 27029 chromosome, complete genome8e-0663.9BLASTN svgBLASTP svg
NC_015424:4251369*4251369427627324905Aeromonas veronii B565 chromosome, complete genome8e-0663.9BLASTN svgBLASTP svg
NC_018750:33153093315309333886923561Streptomyces venezuelae ATCC 10712, complete genome8e-0663.9BLASTN svgBLASTP svg
NC_002939:1480474*1480474150560725134Geobacter sulfurreducens PCA, complete genome8e-0663.9BLASTN svgBLASTP svg