Pre_GI Gene

Some Help

Host: NC_011004 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011004:5520771 Rhodopseudomonas palustris TIE-1, complete genome

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
55230955523664570uncharacterized peroxidase-related enzymeQuickGO ontologyBLASTP
55237465524432687L-fuculose-phosphate aldolaseQuickGO ontologyBLASTP
55244635525422960PfkB domain proteinQuickGO ontologyBLASTP
55254695526215747short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
55262485527234987quinone oxidoreductase YhdHYhfP familyQuickGO ontologyBLASTP
55273115527814504GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
552805155281641145S ribosomal RNAQuickGO ontologyBLASTP
55282285531053282623S ribosomal RNAQuickGO ontologyBLASTP
5531465553154076tRNA-AlaQuickGO ontologyBLASTP
5531574553165077tRNA-IleQuickGO ontology
55318685533349148216S ribosomal RNAQuickGO ontologyBLASTP
5534217553430690tRNA-SerQuickGO ontologyBLASTP
553451555359991485alphaalpha-trehalose-phosphate synthase UDP-formingQuickGO ontologyBLASTP
55361565536953798HAD-superfamily hydrolase subfamily IIBQuickGO ontologyBLASTP
553695055384371488major facilitator superfamily MFS_1QuickGO ontologyBLASTP
553861955406792061methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
55407805541526747transcriptional regulator AraC familyQuickGO ontologyBLASTP
5541865554352616622-isopropylmalate synthaseQuickGO ontologyBLASTP
554383155443164862Fe-2S-binding domain proteinQuickGO ontologyBLASTP
554442755467812355aldehyde oxidase and xanthine dehydrogenase molybdopterin bindingQuickGO ontologyBLASTP