Pre_GI Gene

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Host: NC_012808 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012808:3972983 Methylobacterium extorquens AM1, complete genome

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39729833973543561hypothetical protein
39736003974424825succinate dehydrogenase iron-sulfur subunitQuickGO ontologyBLASTP
39746683975228561hypothetical protein
397523339770051773hypothetical proteinBLASTP
397725639782781023Arabinose-5-phosphate isomeraseQuickGO ontologyBLASTP
39838493984292444hypothetical proteinBLASTP
39847313985495765Enoyl-CoA hydrataseisomerase family proteinQuickGO ontologyBLASTP
39855373986355819putative short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
39863523987206855Short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
398723239882361005putative magnesiumcobalt transport proteinQuickGO ontologyBLASTP
39884473988989543hypothetical proteinBLASTP
39891483989393246hypothetical protein
398952739911941668methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
39912963991577282hypothetical protein
39933333993611279hypothetical proteinBLASTP
39936773994393717putative Endonuclease III DNA-apurinic or apyrimidinic site lyaseQuickGO ontologyBLASTP
39945023995422921Short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP