Pre_GI Gene

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Host: NC_007492 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007492:2035761 Pseudomonas fluorescens PfO-1, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
203576120372031443Cytochrome c oxidase cbb3-type subunit IQuickGO ontologyBLASTP
20376852038638954Cytochrome c oxidase cbb3-type subunit IIIQuickGO ontologyBLASTP
20386352038832198cytochrome c oxidase cbb3-type CcoQ subunitQuickGO ontologyBLASTP
20388382039446609Cytochrome C oxidase mono-heme subunitFixOQuickGO ontologyBLASTP
203945720408811425Cytochrome c oxidase cbb3-type subunit IQuickGO ontologyBLASTP
20409682041642675hypothetical proteinBLASTP
204201820453593342hypothetical protein
204625920491262868hypothetical proteinBLASTP
20496642050029366hypothetical proteinBLASTP
20501172050476360hypothetical proteinBLASTP
205100220525671566chemotaxis sensory transducer PasPac sensorQuickGO ontologyBLASTP
20526702053461792Abortive infection proteinQuickGO ontologyBLASTP
20535952054281687ThiJPfpIQuickGO ontologyBLASTP
20543712055354984Transcriptional Regulator AraC familyQuickGO ontologyBLASTP
20553232056222900Alphabeta hydrolase foldQuickGO ontologyBLASTP
20562332056622390hypothetical protein
205693120587601830Glycoside hydrolase 15-likeQuickGO ontologyBLASTP
20587532059553801Short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP