Pre_GI Gene

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Host: NC_015957 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015957:3342169 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
33421693342957789Lactate utilization protein BCQuickGO ontologyBLASTP
334295433444561503iron-sulfur cluster binding proteinQuickGO ontologyBLASTP
33444533345205753hypothetical proteinBLASTP
334519633467881593carbohydrate kinase FGGYQuickGO ontologyBLASTP
334701433490532040rhamnulose-1-phosphate aldolasealcohol dehydrogenaseQuickGO ontologyBLASTP
334957633507361161L-rhamnose isomeraseQuickGO ontologyBLASTP
335076733539703204alpha-L-rhamnosidaseQuickGO ontologyBLASTP
335424633558261581ABC transporter-like proteinQuickGO ontologyBLASTP
335582333568661044ABC transporter integral membrane subunitQuickGO ontologyBLASTP
33568633357834972ABC transporter integral membrane subunitQuickGO ontologyBLASTP
335786533589441080rhamnose ABC transporter periplasmic rhamnose-binding proteinQuickGO ontologyBLASTP
33589583359278321hypothetical proteinBLASTP
335953633609751440hypothetical proteinBLASTP