Pre_GI Gene

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Host: NC_013093 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013093:3157897 Actinosynnema mirum DSM 43827, complete genome

Host Lineage: Actinosynnema mirum; Actinosynnema; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Isolation: Blade of grass from Raritan River NJ; Country: USA; Temp: Mesophile; Temp: 10-30C; Habitat: Soil. This bacterium produces the antibiotic nocardicin A. Soil dwelling, nonmotile aerobe it has fine hyphae which form aerial and substrate mycelia. Motile spores are borne on synnemata, compact groups of erect hyphae. It produces nocardicin antibiotics and is able to inhibit growth of several Gram-positive bacteria as well as some filamentous fungi and yeasts.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
315789731597561860hypothetical protein
315989831614661569methyl-accepting chemotaxis sensory transducer with GAF sensorQuickGO ontologyBLASTP
31616963162205510putative GAF sensor proteinQuickGO ontologyBLASTP
31624603163110651ErfKYbiSYcfSYnhG family proteinQuickGO ontologyBLASTP
31632673163428162hypothetical protein
31636843163986303hypothetical proteinBLASTP
316454131718847344YD repeat proteinQuickGO ontologyBLASTP
31719623172429468hypothetical proteinBLASTP
31724423172726285hypothetical protein
31728273173732906transcriptional regulator RpiR familyQuickGO ontologyBLASTP
317387131752681398major facilitator superfamily MFS_1QuickGO ontologyBLASTP
31752653175699435putative GAF sensor proteinQuickGO ontologyBLASTP
317569631769071212amidohydrolaseQuickGO ontologyBLASTP
31769683177612645two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
317760031787691170histidine kinaseQuickGO ontologyBLASTP
31788553179625771ABC transporter relatedQuickGO ontologyBLASTP
317962531820932469protein of unknown function DUF214QuickGO ontologyBLASTP