Pre_GI: BLASTN Hits

Some Help

Query: NC_007005:2149275 Pseudomonas syringae pv. syringae B728a, complete genome

Start: 2149275, End: 2170426, Length: 21152

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007005:830467*83046785407423608Pseudomonas syringae pv. syringae B728a, complete genome0759BLASTN svgBLASTP svg
NC_004129:2034500*2034500206459930100Pseudomonas fluorescens Pf-5, complete genome2e-84321BLASTN svgBLASTP svg
NC_004578:5336773*5336773541660879836Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-79303BLASTN svgBLASTP svg
NC_009439:2337024*2337024236235425331Pseudomonas mendocina ymp, complete genome9e-71276BLASTN svgBLASTP svg
NC_012660:5121219*5121219514562724409Pseudomonas fluorescens SBW25 chromosome, complete genome4e-45190BLASTN svgBLASTP svg
NC_015410:2838132*2838132286405125920Pseudomonas mendocina NK-01 chromosome, complete genome6e-44186BLASTN svgBLASTP svg
NC_015563:44148544414854443826923416Delftia sp. Cs1-4 chromosome, complete genome9e-37163BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome1e-32149BLASTN svgBLASTP svg
NC_012912:1788308*1788308184662758320Dickeya zeae Ech1591, complete genome8e-28133BLASTN svgBLASTP svg
NC_013592:1730505*1730505176316532661Dickeya dadantii Ech586, complete genome8e-28133BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_013421:3117639*3117639314038322745Pectobacterium wasabiae WPP163, complete genome5e-23117BLASTN svgBLASTP svg
NC_009778:2227627*2227627228586658240Enterobacter sakazakii ATCC BAA-894, complete genome5e-23117BLASTN svgBLASTP svg
NC_004547:1970686*1970686199651325828Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-22115BLASTN svgBLASTP svg
NC_012917:2921932*2921932295050128570Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-22115BLASTN svgBLASTP svg
NC_012691:2097287*2097287211808120795Tolumonas auensis DSM 9187, complete genome3e-21111BLASTN svgBLASTP svg
NC_010465:2383219*2383219240542422206Yersinia pseudotuberculosis YPIII, complete genome3e-21111BLASTN svgBLASTP svg
NC_004088:2491303*2491303251808626784Yersinia pestis KIM, complete genome3e-21111BLASTN svgBLASTP svg
NC_008340:2034810*2034810206790533096Alkalilimnicola ehrlichei MLHE-1, complete genome1e-20109BLASTN svgBLASTP svg
NC_008570:1986466*1986466201051824053Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome1e-20109BLASTN svgBLASTP svg
NC_009348:2631759*2631759265138819630Aeromonas salmonicida subsp. salmonicida A449, complete genome1e-20109BLASTN svgBLASTP svg
AC_000091:1083798*1083798110686123064Escherichia coli W3110 DNA, complete genome3e-18101BLASTN svgBLASTP svg
NC_000913:1087062*1087062110699919938Escherichia coli K12, complete genome3e-18101BLASTN svgBLASTP svg
NC_003197:12075971207597123259925003Salmonella typhimurium LT2, complete genome3e-18101BLASTN svgBLASTP svg
NC_004337:1065609*1065609109071125103Shigella flexneri 2a str. 301, complete genome3e-18101BLASTN svgBLASTP svg
NC_006511:1770000*1770000179181621817Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-18101BLASTN svgBLASTP svg
NC_006905:1186895*1186895121502828134Salmonella enterica subsp. enterica serovar Choleraesuis str3e-18101BLASTN svgBLASTP svg
NC_008258:1076922*1076922110024923328Shigella flexneri 5 str. 8401, complete genome3e-18101BLASTN svgBLASTP svg
NC_010067:1782998*1782998180098317986Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-18101BLASTN svgBLASTP svg
NC_010102:1979742*1979742200183422093Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-18101BLASTN svgBLASTP svg
NC_010468:2809125*2809125282748818364Escherichia coli ATCC 8739, complete genome3e-18101BLASTN svgBLASTP svg
NC_015968:1709680*1709680173221922540Enterobacter asburiae LF7a chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_015663:3466471*3466471350514038670Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_014121:2629075*2629075265233623262Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-18101BLASTN svgBLASTP svg
NC_013716:1178383*1178383120516726785Citrobacter rodentium ICC168, complete genome3e-18101BLASTN svgBLASTP svg
NC_011149:1987291*1987291203423646946Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-18101BLASTN svgBLASTP svg
NC_011083:12165001216500123593619437Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-18101BLASTN svgBLASTP svg
NC_011080:12099351209935123471124777Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-18101BLASTN svgBLASTP svg
NC_004631:1842050*1842050186312621077Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-1695.6BLASTN svgBLASTP svg
NC_003198:1117687*1117687114274925063Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-1695.6BLASTN svgBLASTP svg
NC_007946:1119000*1119000114261923620Escherichia coli UTI89, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_008577:2115440*2115440215134235903Shewanella sp. ANA-3 chromosome 1, complete sequence7e-1693.7BLASTN svgBLASTP svg
NC_005085:1269787*1269787132843458648Chromobacterium violaceum ATCC 12472, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_008322:2077628*2077628211677239145Shewanella sp. MR-7, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008321:1993541*1993541201934825808Shewanella sp. MR-4, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_004129:22348512234851226009925249Pseudomonas fluorescens Pf-5, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002505:1892430*1892430192509932670Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete7e-1383.8BLASTN svgBLASTP svg
NC_004603:1115134*1115134114139026257Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete7e-1383.8BLASTN svgBLASTP svg
NC_013456:2528284*2528284254628518002Vibrio sp. Ex25 chromosome 1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015572:1974000*1974000199616522166Methylomonas methanica MC09 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_019902:23069612306961233161224652Thioalkalivibrio nitratireducens DSM 14787, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014366:1435785*1435785146660130817Gamma proteobacterium HdN1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013416:1429881*1429881145213822258Aggregatibacter actinomycetemcomitans D11S-1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_005296:5238882*5238882526489126010Rhodopseudomonas palustris CGA009, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011004:5520771*5520771554678126011Rhodopseudomonas palustris TIE-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015703:3842144*3842144386963427491Runella slithyformis DSM 19594 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014151:36876123687612370763420023Cellulomonas flavigena DSM 20109 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008740:29059902905990294863442645Marinobacter aquaeolei VT8, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_005070:1144777*1144777118894644170Synechococcus sp. WH 8102, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009667:1371924*1371924140112629203Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_005955:173436*17343619910325668Bartonella quintana str. Toulouse, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007508:1221500*1221500126063139132Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010172:798923*79892388030381381Methylobacterium extorquens PA1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010505:1205747*1205747122904923303Methylobacterium radiotolerans JCM 2831, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010725:750911*75091177963428724Methylobacterium populi BJ001, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014217:4597426*4597426462121223787Starkeya novella DSM 506 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014932:1232346*1232346130968277337Bartonella clarridgeiae 73, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_016010:1169850*1169850119450124652Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete3e-0971.9BLASTN svgBLASTP svg
NC_001318:479709*47970950779828090Borrelia burgdorferi B31, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008570:3220539*3220539328055660018Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010693:112329523295Erwinia tasmaniensis plasmid pET46, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_008146:86131986131994414682828Mycobacterium sp. MCS, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008705:86862386862395099082368Mycobacterium sp. KMS, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009725:34473363447336347083123496Bacillus amyloliquefaciens FZB42, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012881:2310141*2310141233309622956Desulfovibrio salexigens DSM 2638, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013416:668152*66815269868530534Aggregatibacter actinomycetemcomitans D11S-1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014366:28265752826575285281526241Gamma proteobacterium HdN1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_020410:3440327*3440327346496824642Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete2e-0661.9BLASTN svgBLASTP svg
NC_010673:479552*47955250738827837Borrelia hermsii DAH, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009512:56325915632591568653153941Pseudomonas putida F1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008277:485299*48529951060325305Borrelia afzelii PKo, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_002947:2589951*2589951263659946649Pseudomonas putida KT2440, complete genome1e-0560BLASTN svgBLASTP svg