Pre_GI: BLASTP Hits

Some Help

Query: NC_016830:2247789:2260516 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 2260516, End: 2261385, Length: 870

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:4630367:465120246512024652071870Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, AraC family9e-157552
NC_012660:4149487:415869441586944159563870Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family transcriptional regulator7e-142503
NC_015733:1976752:199008919900891990910822Pseudomonas putida S16 chromosome, complete genomeAraC family transcriptional regulator2e-114411
NC_011146:1699702:170634617063461707206861Geobacter bemidjiensis Bem, complete genometranscriptional regulator, AraC family1e-79296
NC_012881:2957309:296862029686202969513894Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, AraC family4e-32138
NC_010002:3399770:341701734170173417997981Delftia acidovorans SPH-1, complete genometranscriptional regulator, AraC family2e-30132
NC_015563:4093650:410028141002814101261981Delftia sp. Cs1-4 chromosome, complete genomeAraC family transcriptional regulator1e-29130
NC_004129:1741816:176003317600331760980948Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family1e-24114
NC_015730:921735:939071939071939925855Roseobacter litoralis Och 149 chromosome, complete genomeHTH-type AraC family transcriptional regulator2e-21103
NC_004663:2935060:295745829574582958405948Bacteroides thetaiotaomicron VPI-5482, complete genometranscriptional regulator4e-21102
NC_011830:4234392:423728342372834238158876Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, AraC family1e-1894
NC_015703:5865921:589589958958995896768870Runella slithyformis DSM 19594 chromosome, complete genomeAraC family transcriptional regulator5e-1891.7
NC_016935:3819500:382494838249483825880933Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator1e-1790.9
NC_015690:3269000:327450832745083275440933Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-1790.1
NC_003909:1205605:122746412274641228366903Bacillus cereus ATCC 10987, complete genometranscriptional regulator, AraC family1e-1273.9
NC_007508:2072738:209256320925632093486924Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transcriptional regulator, AraC family3e-1169.3
NC_004663:5437794:5437794543779454389211128Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein3e-1169.3
NC_009089:3889811:391633739163373916819483Clostridium difficile 630, complete genomeAraC-family transcriptional regulator7e-1168.2
NC_014624:2912527:292261829226182923523906Eubacterium limosum KIST612 chromosome, complete genomeAraC family transcription regulator8e-1167.8
NC_011593:1830500:184190718419071842767861Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,transcription activator, effector binding2e-1067
NC_017218:1166844:117820011782001179060861Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomebacterial transcription activator, effector-binding domain protein2e-1067
NC_017219:1830353:184169718416971842557861Bifidobacterium longum subsp. infantis ATCC 15697, complete genometranscriptional regulator2e-1067
NC_010001:851671:877705877705878502798Clostridium phytofermentans ISDg, complete genometranscriptional regulator, AraC family2e-1066.6
NC_011740:1595381:160192516019251602725801Escherichia fergusonii ATCC 35469, complete genomehypothetical protein, putative transcriptional activator for multiple antibiotic resistance2e-1066.6
NC_009922:2487492:249187424918742492782909Alkaliphilus oremlandii OhILAs, complete genometranscriptional regulator, AraC family2e-1066.6
NC_015275:3594890:359489035948903595747858Clostridium lentocellum DSM 5427 chromosome, complete genometranscriptional regulator, AraC family3e-1066.2
UCMB5137:1676568:168813616881361689008873Bacillus atrophaeus UCMB-5137putative AraC/XylS family transcriptional regulator1e-0963.9
NC_021066:5342127:534681253468125347165354Raoultella ornithinolytica B6, complete genomemultiple antibiotic resistance protein marA1e-0963.9
NC_014976:2735423:275312427531242753996873Bacillus subtilis BSn5 chromosome, complete genomeputative AraC/XylS family transcriptional regulator1e-0963.9
NC_014376:3671441:367192236719223672812891Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional regulator, AraC family2e-0963.5
NC_020291:5752099:575858357585835759473891Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, AraC family3e-0962.8
NC_010001:1806000:181448218144821815366885Clostridium phytofermentans ISDg, complete genometranscriptional regulator, AraC family4e-0962.4
NC_020244:516993:541859541859542731873Bacillus subtilis XF-1, complete genomeputative transcriptional regulator4e-0962.4
NC_019897:73957:125481125481126383903Thermobacillus composti KWC4 chromosome, complete genomeDNA-binding domain-containing protein5e-0962
NC_019842:2575000:258107725810772581949873Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,HTH-type transcriptional regulator5e-0962
NC_017188:461177:494859494859495749891Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional regulator (AraC/XylS family) protein4e-0962
NC_017191:467207:500881500881501771891Bacillus amyloliquefaciens XH7 chromosome, complete genomeAraC/XylS family transcriptional regulator protein4e-0962
NC_009617:2355662:237497723749772375852876Clostridium beijerinckii NCIMB 8052 chromosome, complete genometranscription activator, effector binding6e-0961.6
NC_011777:161505:180382180382181227846Bacillus cereus AH820 plasmid pAH820_272, complete sequencetranscriptional activator, AraC family6e-0961.6
NC_014837:33014:416424164242040399Pantoea sp. At-9b chromosome, complete genomeAraC family transcriptional regulator7e-0961.6
NC_016627:841269:842719842719843597879Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein8e-0961.2
NC_012881:2957309:296953829695382969999462Desulfovibrio salexigens DSM 2638, complete genometranscription activator effector binding8e-0961.2
NC_011898:3159411:319981931998193200712894Clostridium cellulolyticum H10, complete genometranscriptional regulator, AraC family2e-0860.1
NC_013406:1217385:127150412715041272373870Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator2e-0860.1
NC_019896:3491000:349471934947193495597879Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein2e-0860.1
NC_014479:509919:531264531264532136873Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative AraC/XylS family transcriptional regulator2e-0860.1
NC_016582:7699420:770224677022467703118873Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative AraC family transcriptional regulator2e-0860.1
NC_015062:58826:588265882659182357Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequenceAraC family transcriptional regulator3e-0859.7
NC_011751:348000:368727368727369617891Escherichia coli UMN026 chromosome, complete genomeputative transcriptional regulator ykgA2e-0859.7
NC_009436:1141376:118085711808571181198342Enterobacter sp. 638, complete genomeAraC family transcriptional regulator3e-0859.3
NC_017195:517344:540528540528541400873Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetranscriptional regulator, AraC family4e-0858.9
NC_014500:1646854:165106016510601651992933Dickeya dadantii 3937 chromosome, complete genomeRight origin-binding protein6e-0858.5
NC_004431:364000:400086400086400976891Escherichia coli CFT073, complete genomeHypothetical transcriptional regulator ykgA6e-0858.5
NC_020063:3352516:335776133577613358105345Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain6e-0858.5
NC_020272:1384525:139716613971661398047882Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator YdeE5e-0858.5
NC_012214:2019000:203667520366752037016342Erwinia pyrifoliae Ep1/96, complete genomeTranscriptional regulator, AraC family5e-0858.5
NC_016641:3058571:307417930741793075060882Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional activator ramA7e-0858.2
NC_013941:378555:396828396828397718891Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeAraC family transcriptional regulator7e-0858.2
NC_014720:154111:1959181959181974771560Caldicellulosiruptor kronotskyensis 2002 chromosome, completetwo component transcriptional regulator, arac family6e-0858.2
NC_009800:349592:366188366188367045858Escherichia coli HS, complete genometranscriptional regulator, AraC family6e-0858.2
NC_011830:2940500:2949851294985129522582408Desulfitobacterium hafniense DCB-2, complete genome8e-0857.8
NC_010516:2305110:230511023051102306000891Clostridium botulinum B1 str. Okra, complete genometranscriptional regulator, AraC family8e-0857.8
NC_016935:1365463:139694713969471397861915Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator1e-0757.8
NC_015500:159199:166509166509167342834Treponema brennaborense DSM 12168 chromosome, complete genometranscriptional regulator, AraC family1e-0757.4
NC_009454:1577319:158710915871091588020912Pelotomaculum thermopropionicum SI, complete genomehypothetical protein1e-0757.4
NC_008253:334467:392253392253393110858Escherichia coli 536, complete genomeputative bacterial regulatory helix-turn-helix proteins, AraC family1e-0757.4
NC_015690:3941113:397750939775093978423915Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator1e-0757.4
NC_007946:289425:335558335558336448891Escherichia coli UTI89, complete genomehypothetical transcriptional regulator YkgA2e-0757
NC_008563:318993:337148337148338038891Escherichia coli APEC O1, complete genomeputative transcriptional regulator2e-0757
NC_011749:34056:423404234042756417Escherichia coli UMN026 plasmid p1ESCUM, complete sequencetranscriptionnal regulator involved in tetracycline resistance1e-0757
NC_010939:405477:414597414597415013417Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTransposon Tn10 TetD protein1e-0757
CU928145:4950723:497605449760544976470417Escherichia coli 55989 chromosome, complete genomeputative operon control protein1e-0757
NC_011748:4950723:497605449760544976470417Escherichia coli 55989, complete genomeputative operon control protein1e-0757
NC_017328:1075535:110484811048481105264417Shigella flexneri 2002017 chromosome, complete genomeputative transcriptional regulator TetD1e-0757
NC_020418:448687:460865460865461281417Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-0757
NC_011742:291237:324923324923325780858Escherichia coli S88 chromosome, complete genomePutatve transcriptional regulator ykgA2e-0756.6
NC_011601:273430:295401295401296258858Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding transcriptional regulator, AraC-type2e-0756.6
NC_012590:2501593:2513772251377225150101239Corynebacterium aurimucosum ATCC 700975, complete genomeHTH-type transcriptional regulator2e-0756.6
NC_014364:773500:786583786583787473891Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, AraC family3e-0756.2
NC_012880:2871480:288633428863342887275942Dickeya dadantii Ech703, complete genometranscriptional regulator, AraC family2e-0756.2
NC_013203:472679:490778490778491623846Atopobium parvulum DSM 20469, complete genometranscriptional regulator, AraC family4e-0755.8
NC_010793:541040:562769562769563122354Orientia tsutsugamushi str. Ikeda, complete genomeDNA gyrase inhibitor4e-0755.5
NC_010473:279948:291224291224291910687Escherichia coli str. K-12 substr. DH10B, complete genomepredicted DNA-binding transcriptional regulator6e-0755.1
AC_000091:303719:315674315674316360687Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator6e-0755.1
NC_000913:303719:315674315674316360687Escherichia coli K12, complete genomepredicted DNA-binding transcriptional regulator6e-0755.1
NC_021066:3769405:378178637817863782139354Raoultella ornithinolytica B6, complete genometranscriptional regulator6e-0755.1
NC_010498:301000:341410341410342267858Escherichia coli SMS-3-5, complete genomeAraC family transcriptional regulator6e-0755.1
NC_012947:3487392:349562134956213496472852Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeAraC family transcriptional regulator7e-0754.7
NC_014923:2439197:246013724601372461012876Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehelix-turn-helix- domain containing protein AraC type9e-0754.3
NC_015675:2567000:258730225873022588210909Mesorhizobium opportunistum WSM2075 chromosome, complete genomeAraC family transcriptional regulator1e-0654.3
NC_004838:51013:771187711878023906Yersinia pestis KIM plasmid pMT-1, complete sequenceF1 capsule positive regulator1e-0653.9
NC_008120:62000:734377343774360924Yersinia pestis Antiqua plasmid pMT, complete sequenceF1 operon positive regulatory protein1e-0653.9
NC_005815:61148:775457754578468924Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completeputative F1 operon positive regulatory protein1e-0653.9
NC_008118:56777:712147121472137924Yersinia pestis Nepal516 plasmid pMT, complete sequenceF1 operon positive regulatory protein1e-0653.9
NC_003134:64672:813348133482257924Yersinia pestis CO92 plasmid pMT1, complete sequenceputative F1 operon positive regulatory protein1e-0653.9
NC_009378:62215:766507665077573924Yersinia pestis Pestoides F plasmid MT, complete sequenceF1 operon positive regulatory protein1e-0653.9
NC_019973:2417000:2437006243700624381151110Mesorhizobium australicum WSM2073, complete genomeDNA-binding domain-containing protein, AraC-type1e-0653.5
NC_020063:2480983:249158224915822492394813Enterobacteriaceae bacterium strain FGI 57, complete genomeDNA-binding domain-containing protein, AraC-type2e-0653.1
NC_018515:595500:597465597465598343879Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeDNA-binding domain-containing protein2e-0653.1
NC_014376:1217000:125081512508151251648834Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional regulator, AraC family3e-0652.8
NC_014364:4488875:452608945260894526937849Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, AraC family4e-0652.4
NC_010501:3448389:346606534660653466964900Pseudomonas putida W619, complete genometranscriptional regulator, AraC family4e-0652
NC_014306:3210311:321341032134103213877468Erwinia billingiae Eb661, complete genomeDNA gyrase inhibitor7e-0651.2