Pre_GI Gene

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Host: NC_010473 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010473:279948 Escherichia coli str. K-12 substr. DH10B, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
279269279979711hypothetical proteinBLASTP
2799482815911644predicted receptorQuickGO ontologyBLASTP
2815812841062526predicted aromatic compound dioxygenaseQuickGO ontologyBLASTP
284132284800669hypothetical proteinBLASTP
284858285445588Mat fimbrillinQuickGO ontologyBLASTP
285520286110591predicted regulatorQuickGO ontologyBLASTP
286886287113228hypothetical proteinBLASTP
287148287288141rpmJ L36 paralogQuickGO ontologyBLASTP
287288287551264rpmE L31 paralogQuickGO ontologyBLASTP
289131290018888attaching and effacing protein pathogenesis factorQuickGO ontologyBLASTP
290056290364309IS3 element protein InsEQuickGO ontologyBLASTP
290361291227867IS3 element protein InsFQuickGO ontologyBLASTP
291224291910687predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
292500293093594conserved inner membrane proteinQuickGO ontologyBLASTP
293105293341237hypothetical proteinBLASTP
2934502947751326predicted oxidoreductase with FADNADP-binding domain and dimerization domainQuickGO ontologyBLASTP
295001295855855predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
296382297101720predicted oxidoreductaseQuickGO ontologyBLASTP
2971122985391428predicted amino acid dehydrogenase with NADP-binding domain and ferridoxin-like domainQuickGO ontologyBLASTP
298532299227696predicted transporterQuickGO ontologyBLASTP
299470300138669predicted inner membrane proteinQuickGO ontologyBLASTP
3003513020211671choline dehydrogenase a flavoproteinQuickGO ontologyBLASTP
3020353035071473betaine aldehyde dehydrogenase NAD-dependentQuickGO ontologyBLASTP