Pre_GI Gene

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Host: NC_011742 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011742:291237 Escherichia coli S88 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2912372922921056outer membrane phosphoporin protein EQuickGO ontologyBLASTP
2925812936841104gamma-glutamyl kinaseQuickGO ontologyBLASTP
2936962949491254gamma-glutamyl phosphate reductaseQuickGO ontologyBLASTP
29506429513976tRNA-ThrQuickGO ontologyBLASTP
295294295632339CP4-like integraseQuickGO ontologyBLASTP
2967173008474131Vacuolating autotransporter toxinQuickGO ontologyBLASTP
301440301655216transposase InsA ORF1 IS1QuickGO ontologyBLASTP
301957302133177transposase InsB ORF1 IS1 FragmentQuickGO ontologyBLASTP
302512302742231hypothetical proteinBLASTP
302957303571615hypothetical proteinBLASTP
304456305166711hypothetical proteinBLASTP
3051353067781644surface or exported proteinQuickGO ontologyBLASTP
3067683092932526hypothetical proteinBLASTP
309319309987669hypothetical proteinBLASTP
310044310631588common pilus ECPQuickGO ontologyBLASTP
310705311295591transcriptional regulatorQuickGO ontologyBLASTP
31247131273426450S ribosomal protein L31QuickGO ontologyBLASTP
3136743148161143NADH-dependent flavin oxidoreductaseQuickGO ontologyBLASTP
314988315908921hypothetical proteinBLASTP
316002316991990LysR family transcriptional regulatorQuickGO ontologyBLASTP
317116318084969transcriptional regulator lysR familyQuickGO ontologyBLASTP
318115319104990aldo-keto reductaseQuickGO ontologyBLASTP
319131319982852aldo-keto reductaseQuickGO ontologyBLASTP
3205483247984251adhesinQuickGO ontologyBLASTP
324923325780858Putatve transcriptional regulator ykgAQuickGO ontologyBLASTP
326013326897885reductaseQuickGO ontologyBLASTP
327057327650594hypothetical proteinBLASTP
327662327898237hypothetical proteinBLASTP
3280073293321326pyridine nucleotide-disulfide oxidoreductaseQuickGO ontologyBLASTP
329559330413855AraC family transcriptional regulatorQuickGO ontologyBLASTP