Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:378555 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
377876378631756hypothetical proteinBLASTP
3785553801981644receptorQuickGO ontologyBLASTP
3801883827132526hypothetical proteinBLASTP
382739383407669hypothetical proteinBLASTP
383465384052588hypothetical proteinBLASTP
384127384717591MatAQuickGO ontologyBLASTP
385122385346225hypothetical proteinBLASTP
385493385684192hypothetical proteinBLASTP
38575438589414150S ribosomal protein L36QuickGO ontologyBLASTP
385894386160267ribosomal protein L31QuickGO ontologyBLASTP
3870963882381143oxidoreductase FADFMN-binding proteinQuickGO ontologyBLASTP
388473389393921hypothetical proteinBLASTP
389487390476990LysR family transcriptional regulatorQuickGO ontologyBLASTP
390764391120357hypothetical protein
391151391279129hypothetical protein
39131339188857625-diketo-D-gluconic acid reductase AQuickGO ontologyBLASTP
3924543967074254hypothetical proteinBLASTP
396828397718891AraC family transcriptional regulatorQuickGO ontologyBLASTP
397919398803885dehydrogenaseQuickGO ontologyBLASTP
398963399556594hypothetical proteinBLASTP
399539399808270hypothetical proteinBLASTP
399568399819252hypothetical proteinBLASTP