Pre_GI: BLASTP Hits

Some Help

Query: NC_016812:258500:264432 Sinorhizobium fredii HH103, complete genome

Start: 264432, End: 265520, Length: 1089

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011989:594353:6107606107606117911032Agrobacterium vitis S4 chromosome 1, complete sequenceIntegrase9e-97353
NC_020453:1881904:1891278189127818924591182Agromonas oligotrophica S58 DNA, complete genomeputative prophage integrase6e-29128
NC_020418:2084937:2084937208493720860881152Morganella morganii subsp. morganii KT, complete genomePhage integrase5e-28125
NC_011094:593100:6007016007016018641164Salmonella enterica subsp. enterica serovar Schwarzengrund strprophage DLP12 integrase3e-27122
NC_013282:1200993:1204148120414812053111164Cronobacter turicensis, complete genomeProphage DLP12 integrase3e-27122
NC_007298:1129889:1137870113787011388861017Dechloromonas aromatica RCB, complete genomePhage integrase5e-26118
NC_011205:609464:6170646170646182271164Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853prophage DLP12 integrase2e-25117
NC_012947:3231893:3247313324731332484761164Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeintegrase7e-25115
NC_012967:531000:5369295369295380921164Escherichia coli B str. REL606 chromosome, complete genomeputative integrase7e-25115
NC_000913:558920:5640385640385652011164Escherichia coli K12, complete genomeDLP12 prophage; predicted integrase6e-25115
NC_010473:498252:5033705033705045331164Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted integrase6e-25115
AC_000091:558920:5640385640385652011164Escherichia coli W3110 DNA, complete genomepredicted integrase6e-25115
NC_012759:461680:4667984667984679611164Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative integrase6e-25115
NC_011751:643976:6449436449436461061164Escherichia coli UMN026 chromosome, complete genomeputative integrase; DLP12 prophage6e-25115
NC_015731:2148517:2150716215071621518041089Nitrosomonas sp. Is79A3 chromosome, complete genomeintegrase family protein4e-25115
NC_011415:600375:6083326083326094951164Escherichia coli SE11 chromosome, complete genomephage integrase2e-24113
NC_007520:903799:9043479043479053721026Thiomicrospira crunogena XCL-2, complete genomePhage integrase3e-23109
NC_012751:1538500:1538746153874615398911146Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeAPSE-2 prophage; integrase4e-23109
NC_004741:310382:3138433138433150061164Shigella flexneri 2a str. 2457T, complete genomeputative phage integrase5e-23108
NC_009800:289000:2918312918312929911161Escherichia coli HS, complete genomesite-specific recombinase, phage integrase family5e-23108
NC_008258:269806:2774612774612786211161Shigella flexneri 5 str. 8401, complete genomeputative integrase5e-23108
NC_017328:303987:3104213104213115811161Shigella flexneri 2002017 chromosome, complete genomephage integrase family site-specific recombinase5e-23108
NC_014006:2932959:2935029293502929360661038Sphingobium japonicum UT26S chromosome 1, complete genomeputative integrase1e-22107
NC_020418:3133831:3146831314683131479941164Morganella morganii subsp. morganii KT, complete genomeintegrase2e-22107
NC_015593:2841856:2849928284992828509651038Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeintegrase family protein2e-22107
NC_004337:309833:3269163269163280791164Shigella flexneri 2a str. 301, complete genomeputative phage integrase4e-22105
NC_004741:310382:3260603260603272231164Shigella flexneri 2a str. 2457T, complete genomeputative phage integrase4e-22105
NC_014922:825396:8292718292718302961026Haemophilus influenzae F3047 chromosome, complete genomeProphage integrase6e-22105
NC_012724:1308000:1310925131092513119921068Burkholderia glumae BGR1 chromosome 1, complete genomeProphage integrase1e-21104
NC_009567:904922:924429924429925310882Haemophilus influenzae PittGG chromosome, complete genomehypothetical protein1e-21104
NC_016860:364981:3688873688873700501164Salmonella enterica subsp. enterica serovar Typhimurium strintegrase8e-22104
NC_006905:368942:3728473728473740101164Salmonella enterica subsp. enterica serovar Choleraesuis strInt2e-21103
NC_014355:243543:2579012579012590221122Candidatus Nitrospira defluvii, complete genomephage integrase8e-21101
NC_011083:374000:3768503768503780131164Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,site-specific recombinase, phage integrase family2e-20100
NC_012214:2805297:282140528214052822034630Erwinia pyrifoliae Ep1/96, complete genomephage integrase family, fragment7e-2098.6
NC_014355:1223243:1233478123347812345481071Candidatus Nitrospira defluvii, complete genomeputative integrase1e-1997.8
NC_015731:3274739:3293661329366132946981038Nitrosomonas sp. Is79A3 chromosome, complete genomeintegrase family protein2e-1997.1
NC_016809:389561:4020064020064030491044Haemophilus influenzae 10810, complete genomeDLP12 prophage integrase5e-1995.5
NC_011283:4212000:4229167422916742303301164Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase4e-1892.4
NC_016845:1285435:1288374128837412895371164Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,site-specific recombinase, phage integrase family4e-1892.4
NC_014355:288000:2962442962442972841041Candidatus Nitrospira defluvii, complete genomeputative phage integrase3e-1789.7
NC_015850:1006980:1008592100859210096021011Acidithiobacillus caldus SM-1 chromosome, complete genomeputative phage integrase2e-1686.7
NC_015388:1020747:102930310293031030148846Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeintegrase family protein4e-1685.9
NC_014311:1635408:1647196164719616482151020Ralstonia solanacearum PSI07 chromosome, complete genomephage integrase domain5e-1582.4
NC_011757:5693584:5696052569605256971161065Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein8e-1581.6
NC_007759:2179000:2183062218306221841561095Syntrophus aciditrophicus SB, complete genomephage integrase family protein9e-1581.3
NC_003295:1654000:1669739166973916708031065Ralstonia solanacearum GMI1000, complete genomePUTATIVE INTEGRASE/RECOMBINASE PROTEIN2e-1480.1
NC_010513:1162232:117499511749951175825831Xylella fastidiosa M12 chromosome, complete genomephage integrase4e-1479.3
NC_015593:2553500:2557151255715125582871137Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeintegrase family protein8e-1478.2
NC_004463:925140:940715940715941704990Bradyrhizobium japonicum USDA 110, complete genomeprobable site-specific integrase/recombinase1e-1377.8
NC_015422:910292:9166939166939177841092Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase family protein2e-1377
NC_010084:534937:541878541878542864987Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein1e-1274.3
NC_009659:543000:548709548709549695987Janthinobacterium sp. Marseille chromosome, complete genomephage integrase site specific recombinase2e-1273.9
NC_006350:3865584:3873083387308338740841002Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative plasmid recombinase2e-1273.6
NC_008782:841134:851174851174852145972Acidovorax sp. JS42, complete genomephage integrase family protein2e-1273.6
NC_006350:3957454:396679739667973967651855Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative bacteriophage integrase3e-1273.2
NC_016631:4113794:4148964414896441500041041Granulicella mallensis MP5ACTX8 chromosome, complete genomeintegrase family protein5e-1272.4
NC_014910:966761:9810169810169826051590Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein6e-1272
NC_008609:3921113:3938275393827539394831209Pelobacter propionicus DSM 2379, complete genomephage integrase family protein1e-1171.2
NC_002947:2589951:262499526249952625819825Pseudomonas putida KT2440, complete genomeintegrative genetic element Ppu40, integrase2e-1170.9
NC_007434:1809946:1853156185315618541751020Burkholderia pseudomallei 1710b chromosome I, complete sequenceprobable site-specific3e-1169.7
NC_007651:3560652:356953635695363570204669Burkholderia thailandensis E264 chromosome I, complete sequencesite-specific recombinase, phage integrase family4e-1169.3
NC_007519:2847816:2851683285168328529361254Desulfovibrio alaskensis G20 chromosome, complete genomesite-specific recombinase XerD-like5e-1168.9
NC_014973:3290545:3300347330034733013691023Geobacter sp. M18 chromosome, complete genomeintegrase family protein5e-1168.9
NC_007760:4055860:408811340881134088940828Anaeromyxobacter dehalogenans 2CP-C, complete genomePhage integrase8e-1168.2
NC_003919:2435058:245801424580142458607594Xanthomonas axonopodis pv. citri str. 306, complete genomeDNA recombinase9e-1168.2
NC_015424:2726223:275214527521452753110966Aeromonas veronii B565 chromosome, complete genomephage integrase1e-1067.8
NC_005773:106000:1097241097241107971074Pseudomonas syringae pv. phaseolicola 1448A, complete genomeshufflon-specific recombinase2e-1067
NC_015519:2489728:250341725034172504274858Tepidanaerobacter sp. Re1 chromosome, complete genomeintegrase family protein2e-1067
NC_008752:415599:431227431227432225999Acidovorax avenae subsp. citrulli AAC00-1, complete genomephage integrase family protein3e-1066.2
NC_010511:6485500:649108764910876491626540Methylobacterium sp. 4-46 chromosome, complete genome4e-1065.9
NC_008702:2039462:2046178204617820472541077Azoarcus sp. BH72, complete genomesite-specific recombinase, phage integrase family5e-1065.9
NC_014006:2932959:294086529408652941296432Sphingobium japonicum UT26S chromosome 1, complete genomeputative integrase7e-1065.5
NC_012796:1600600:1605716160571616067561041Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase7e-1065.1
NC_013854:2148215:215822121582212159126906Azospirillum sp. B510, complete genomeintegrase9e-1064.7
NC_008800:1300500:1308992130899213101101119Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative integrase/recombinase protein2e-0963.9
NC_014562:469154:475073475073475705633Pantoea vagans C9-1 chromosome, complete genomeTyrosine recombinase xerD2e-0963.9
NC_009656:5505413:552934455293445530342999Pseudomonas aeruginosa PA7 chromosome, complete genomeintegrase2e-0963.5
NC_010172:4185904:4194558419455841955621005Methylobacterium extorquens PA1, complete genomeintegrase family protein2e-0963.5
NC_021184:4456904:446470544647054465562858Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD2e-0963.5
NC_015259:485015:5473145473145485251212Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIntegrase family protein2e-0963.5
NC_008380:4968492:497566649756664976619954Rhizobium leguminosarum bv. viciae 3841, complete genomeputative shufflon-specific DNA recombinase3e-0963.2
NC_004337:309833:311291311291311755465Shigella flexneri 2a str. 301, complete genomeputative phage integrase3e-0963.2
NC_017328:335160:347776347776348240465Shigella flexneri 2002017 chromosome, complete genomeputative phage integrase3e-0963.2
NC_015259:673662:7011397011397022691131Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIntegrase family protein3e-0963.2
NC_004337:309833:312995312995313720726Shigella flexneri 2a str. 301, complete genomeputative phage integrase3e-0963.2
NC_010511:3106418:3119432311943231204481017Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein4e-0962.8
NC_008781:4178115:418438241843824185365984Polaromonas naphthalenivorans CJ2, complete genomephage integrase family protein5e-0962.4
NC_015567:1206727:121020512102051210615411Serratia sp. AS9 chromosome, complete genome7e-0962
NC_015566:1206500:121002012100201210430411Serratia sp. AS12 chromosome, complete genome7e-0962
NC_007508:1446526:1462729146272914638351107Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeshufflon-specific recombinase6e-0962
NC_008313:2685531:2688767268876726898131047Ralstonia eutropha H16 chromosome 1, complete sequencephage integrase family protein8e-0961.6
NC_014623:7482229:7485115748511574862601146Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage integrase family protein9e-0961.6
NC_021184:4493440:451747245174724518329858Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD1e-0861.2
NC_004741:310382:324316324316324609294Shigella flexneri 2a str. 2457T, complete genomeintegrase fragment1e-0861.2
NC_004337:309833:317312317312317605294Shigella flexneri 2a str. 301, complete genomeintegrase1e-0861.2
NC_011000:183928:2032112032112043381128Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative plasmid recombinase2e-0860.8
NC_012796:1049034:1098591109859110997391149Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase2e-0860.8
NC_012917:2971702:2989228298922829902351008Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein1e-0860.8
NC_015942:403296:4146714146714157651095Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein1e-0860.8
NC_020063:3690308:3710476371047637115491074Enterobacteriaceae bacterium strain FGI 57, complete genomeIntegrase2e-0860.5
NC_020260:312805:3177533177533187661014Cronobacter sakazakii Sp291, complete genomephage integrase family site-specific recombinase2e-0860.1
NC_012796:2757500:2757717275771727589461230Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase3e-0860.1
NC_009348:1663870:1671623167162316726781056Aeromonas salmonicida subsp. salmonicida A449, complete genomephage integrase3e-0860.1
NC_014306:1286248:129230312923031293148846Erwinia billingiae Eb661, complete genomesimilar to prophage integrase3e-0860.1
NC_009074:3409849:3414673341467334163881716Burkholderia pseudomallei 668 chromosome I, complete sequenceIntegrase4e-0859.7
NC_012796:1049034:1064468106446810655861119Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase4e-0859.7
NC_016745:1892500:190427419042741905233960Oceanimonas sp. GK1 chromosome, complete genomephage integrase3e-0859.7
NC_020211:4598217:461479946147994615707909Serratia marcescens WW4, complete genomephage integrase family protein3e-0859.7
NC_014972:1621850:163002716300271630962936Desulfobulbus propionicus DSM 2032 chromosome, complete genomeintegrase family protein3e-0859.7
NC_013282:3389619:3405674340567434066931020Cronobacter turicensis, complete genomeIntegrase4e-0859.3
NC_012796:1049034:1129182112918211303061125Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase4e-0859.3
NC_016048:184500:1864981864981876041107Oscillibacter valericigenes Sjm18-20, complete genomeputative integrase4e-0859.3
NC_007651:72952:980039800398578576Burkholderia thailandensis E264 chromosome I, complete sequenceFels-2 prophage protein6e-0858.9
NC_018678:87064:9596595965970681104Alteromonas macleodii str. 'English Channel 673' chromosome,integrase5e-0858.9
NC_011205:2938356:2955002295500229560271026Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage integrase7e-0858.5
NC_015410:1202370:120237012023701203362993Pseudomonas mendocina NK-01 chromosome, complete genomeintegrase7e-0858.5
NC_007651:3719191:373247537324753732954480Burkholderia thailandensis E264 chromosome I, complete sequencesite-specific recombinase, phage integrase family9e-0858.2
NC_003197:2870268:2876815287681528778401026Salmonella typhimurium LT2, complete genomephage tail-like protein9e-0858.2
NC_011149:2802199:2819809281980928208341026Salmonella enterica subsp. enterica serovar Agona str. SL483,phage integrase9e-0858.2
NC_016860:2896254:2900381290038129014061026Salmonella enterica subsp. enterica serovar Typhimurium strphage integrase9e-0858.2
NC_012988:4633930:4641261464126146422741014Methylobacterium extorquens DM4, complete genomeintegrase1e-0757.8
NC_010814:1441327:1473385147338514746501266Geobacter lovleyi SZ, complete genomeintegrase family protein1e-0757.8
NC_009076:3876733:388817438881743888692519Burkholderia pseudomallei 1106a chromosome I, complete sequencesite-specific recombinase, phage integrase family1e-0757.8
NC_016810:2871689:2887497288749728885221026Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage integrase1e-0757.8
NC_016857:2871689:2887497288749728885221026Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage integrase1e-0757.8
NC_017046:2869873:2886239288623928872641026Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage integrase1e-0757.8
NC_012108:2159230:2163721216372121648811161Desulfobacterium autotrophicum HRM2, complete genomepredicted bacteriophage P4 integrase1e-0757.4
NC_003198:4453457:4506245450624545072701026Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage integrase1e-0757.4
NC_006511:2677964:2694468269446826954931026Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphage integrase1e-0757.4
NC_011147:2676972:2690004269000426910291026Salmonella enterica subsp. enterica serovar Paratyphi A strphage integrase1e-0757.4
NC_010622:249625:2798672798672809881122Burkholderia phymatum STM815 chromosome 1, complete sequenceintegrase family protein2e-0757
NC_015684:362236:3848903848903859091020Oligotropha carboxidovorans OM5 chromosome, complete genomeshufflon-specific DNA recombinase2e-0757
NC_016616:134449:1400551400551411311077Dechlorosoma suillum PS chromosome, complete genomesite-specific recombinase XerD2e-0756.6
NC_013194:2020134:203324620332462034163918Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeintegrase family protein3e-0756.6
NC_011742:2823000:2829972282997228309911020Escherichia coli S88 chromosome, complete genomeIntegrase4e-0756.2
NC_012779:2127542:215020621502062151093888Edwardsiella ictaluri 93-146, complete genomeintegrase family protein5e-0755.8
NC_020272:1311932:1320571132057113217311161Bacillus amyloliquefaciens IT-45, complete genomeintegrase-recombinase protein5e-0755.8
NC_014958:3346500:336128833612883362163876Deinococcus maricopensis DSM 21211 chromosome, complete genomeintegrase family protein5e-0755.8
NC_015703:5865921:5868888586888858705041617Runella slithyformis DSM 19594 chromosome, complete genomeintegron integrase5e-0755.8
NC_014205:1257652:1257652125765212586531002Staphylothermus hellenicus DSM 12710 chromosome, complete genomeintegrase family protein6e-0755.5
NC_020418:3022891:3035219303521930362321014Morganella morganii subsp. morganii KT, complete genomehypothetical protein7e-0755.5
NC_007434:1809946:185433418543341854720387Burkholderia pseudomallei 1710b chromosome I, complete sequenceprophage DLP12 integrase1e-0654.7
NC_012796:77071:9607196071971951125Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase1e-0654.3
NC_009943:305854:3313733313733325841212Candidatus Desulfococcus oleovorans Hxd3, complete genomeintegrase family protein1e-0654.3
NC_017030:8599515:8613843861384386150331191Corallococcus coralloides DSM 2259 chromosome, complete genomephage integrase family site specific recombinase1e-0654.3
NC_015711:7905360:7927693792769379289131221Myxococcus fulvus HW-1 chromosome, complete genomephage integrase family site specific recombinase2e-0654.3
NC_008825:564392:5822395822395832431005Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-0653.9
NC_014623:1600360:1600360160036016015471188Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage integrase family protein2e-0653.5
NC_011740:2737467:275423227542322754492261Escherichia fergusonii ATCC 35469, complete genomehypothetical protein3e-0653.5
NC_014623:2418762:2452315245231524535021188Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage integrase family protein3e-0653.1
NC_012967:2105251:2121334212133421223471014Escherichia coli B str. REL606 chromosome, complete genomeintegrase4e-0652.8
NC_008095:6052139:6071158607115860721621005Myxococcus xanthus DK 1622, complete genomesite-specific recombinase, phage integrase family4e-0652.8
NC_012796:3600630:3647091364709136482151125Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase5e-0652.4
NC_005139:1784000:1822239182223918234471209Vibrio vulnificus YJ016 chromosome I, complete sequenceintegrase6e-0652.4
NC_009074:3791232:380255538025553802923369Burkholderia pseudomallei 668 chromosome I, complete sequencesite-specific recombinase, phage integrase family8e-0651.6
NC_011891:4104000:4120462412046241216401179Anaeromyxobacter dehalogenans 2CP-1, complete genomeintegrase family protein8e-0651.6