Pre_GI Gene

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Host: NC_011742 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011742:2823000 Escherichia coli S88 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
28232632823568306DinI-like damage-inducible proteinQuickGO ontologyBLASTP
28235072823797291hypothetical proteinBLASTP
28238492824205357hypothetical proteinBLASTP
282420228262892088bacteriophage replication gene A protein endonucleaseQuickGO ontologyBLASTP
28262862827203918adenine-specific DNA-methyltransferaseQuickGO ontologyBLASTP
28271402827367228DksATraR protein family with a zinc fingerQuickGO ontologyBLASTP
28273672827606240hypothetical proteinBLASTP
28276682828009342hypothetical proteinBLASTP
28280322828256225hypothetical protein
28281272828453327hypothetical proteinBLASTP
28284312828940510regulatory protein cIIQuickGO ontologyBLASTP
28289732829215243phage regulatory proteinQuickGO ontologyBLASTP
28293372829969633phage regulatory protein cIQuickGO ontologyBLASTP
282997228309911020IntegraseQuickGO ontologyBLASTP
283099628322191224hypothetical proteinBLASTP
28327662832963198hypothetical proteinBLASTP
28329602833748789hypothetical proteinBLASTP
28338362834129294hypothetical proteinBLASTP
28341862834332147hypothetical protein
28343402835146807hypothetical proteinBLASTP
28356032835740138protein from DinI-like familyQuickGO ontologyBLASTP
283610528380541950hypothetical proteinBLASTP
28381502838314165BLASTP
28383052838799495hypothetical proteinBLASTP
28388022839245444tail fiber assembly proteinQuickGO ontologyBLASTP
28392172839819603tail fiber chaperone assembly protein e14 prophageQuickGO ontologyBLASTP
28398192840562744phage tail proteinQuickGO ontologyBLASTP
28405662841150585hypothetical proteinBLASTP
284114128421991059baseplate J-like phage proteinQuickGO ontologyBLASTP
28421862842614429tail proteinQuickGO ontologyBLASTP
28426112843159549baseplate assembly phage proteinQuickGO ontologyBLASTP
284315928442381080Tail proteinQuickGO ontologyBLASTP
284423528456051371TailDNA circulation proteinQuickGO ontologyBLASTP