Pre_GI: BLASTP Hits

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Query: NC_016445:89500:107938 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 107938, End: 108843, Length: 906

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:3037345:303774730377473038652906Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA polymerase III epsilon subunit-like 3'-5' exonuclease3e-172604
NC_010554:2646806:272322427232242724129906Proteus mirabilis HI4320, complete genomeplasmid-related exonuclease5e-171600
NC_011146:2304475:232637523263752327283909Geobacter bemidjiensis Bem, complete genomeExonuclease RNase T and DNA polymerase III9e-50197
NC_018000:2543500:256118825611882562159972Sinorhizobium fredii USDA 257 chromosome, complete genomeexonuclease RNase T and DNA polymerase III7e-47187
NC_008686:405159:420268420268421179912Paracoccus denitrificans PD1222 chromosome 1, complete sequenceExonuclease, RNase T and DNA polymerase III8e-44177
NC_010725:3273261:328018132801813281077897Methylobacterium populi BJ001, complete genomeExonuclease RNase T and DNA polymerase III3e-40165
NC_009720:3377071:338825933882593389155897Xanthobacter autotrophicus Py2, complete genomeDNA polymerase III subunit epsilon5e-40165
NC_007626:2204767:225224322522432253163921Magnetospirillum magneticum AMB-1, complete genomeDNA polymerase III epsilon subunit and related 3'-5' exonuclease3e-38159
NC_004463:2475428:249083624908362491441606Bradyrhizobium japonicum USDA 110, complete genomeDNA polymerase III subunit epsilon1e-31137
NC_021171:415771:416797416797417411615Bacillus sp. 1NLA3E, complete genomeexonuclease family protein4e-1685.5
NC_010520:2585014:2616121261612126204194299Clostridium botulinum A3 str. Loch Maree, complete genomeDNA polymerase III, alpha subunit, Gram-positive type1e-1377.4
NC_012658:2584355:2611499261149926157974299Clostridium botulinum Ba4 str. 657 chromosome, complete genomeDNA polymerase III PolC6e-1375.1
NC_010516:2511035:2541591254159125458894299Clostridium botulinum B1 str. Okra, complete genomeDNA polymerase III, alpha subunit, Gram-positive type2e-1273.2
NC_009495:2524000:2553368255336825576664299Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA polymerase III PolC3e-1272.8
NC_009697:2394826:2425391242539124296894299Clostridium botulinum A str. ATCC 19397 chromosome, completeDNA polymerase III PolC3e-1272.8
NC_009698:2367171:2397736239773624020344299Clostridium botulinum A str. Hall chromosome, complete genomeDNA polymerase III PolC3e-1272.8
NC_012563:2721658:2727878272787827321764299Clostridium botulinum A2 str. Kyoto, complete genomeDNA polymerase III, alpha subunit, Gram-positive type1e-1170.9
NC_017294:758992:7723037723037764964194Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeDNA polymerase III PolC2e-1170.1
NC_013515:347671:3919693919693963664398Streptobacillus moniliformis DSM 12112, complete genomeDNA polymerase III, alpha subunit7e-1168.2
NC_015389:2101841:2105296210529621082292934Coriobacterium glomerans PW2 chromosome, complete genomeDNA polymerase III, epsilon subunit1e-1067.4
NC_014366:1663034:167679716767971677699903Gamma proteobacterium HdN1, complete genomehypothetical protein1e-1067
NC_008820:1659612:166282916628291663794966Prochlorococcus marinus str. MIT 9303, complete genomepossible DNA polymerase III, epsilon subunit2e-1066.6
NC_009253:2139379:2156194215619421604744281Desulfotomaculum reducens MI-1 chromosome, complete genomeDNA polymerase III subunit alpha3e-1066.2
NC_015554:4724245:4724245472424547263772133Alteromonas sp. SN2 chromosome, complete genomeDNA polymerase III, epsilon subunit4e-1065.9
NC_008313:2629281:264558126455812646324744Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical membrane associated protein,contains exonuclease domain8e-1064.7
NC_019970:1343670:1355741135574113599734233Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeDNA polymerase III, alpha chain1e-0964.3
NC_007350:1551457:1558499155849915628154317Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,DNA polymerase III alpha chain PolC-type9e-1064.3
NC_014210:3742112:3757353375735337591401788Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,DNA polymerase III, epsilon subunit1e-0963.9
NC_017179:1378875:1381865138186513861634299Clostridium difficile BI1, complete genomeDNA polymerase III PolC-type1e-0963.9
NC_013315:1370000:1372091137209113763894299Clostridium difficile CD196 chromosome, complete genomeDNA polymerase III PolC-type1e-0963.9
NC_014103:3985897:4000185400018540044954311Bacillus megaterium DSM319 chromosome, complete genomeDNA polymerase III subunit alpha2e-0963.5
NC_011772:3787500:3799826379982638041274302Bacillus cereus G9842, complete genomeDNA polymerase III, alpha subunit, Gram-positive type3e-0963.2
NC_010184:3675424:3688149368814936924504302Bacillus weihenstephanensis KBAB4, complete genomeDNA polymerase III, alpha subunit2e-0963.2
NC_011969:3549000:3561396356139635656974302Bacillus cereus Q1 chromosome, complete genomeDNA polymerase iii polc2e-0963.2
NC_011658:3603009:3617434361743436217354302Bacillus cereus AH187 chromosome, complete genomeDNA polymerase III PolC2e-0963.2
NC_016771:3555506:3569931356993135742324302Bacillus cereus NC7401, complete genomeDNA polymerase III subunit alpha2e-0963.2
NC_005957:3638750:3651061365106136553624302Bacillus thuringiensis serovar konkukian str. 97-27, completeDNA polymerase III subunit alpha2e-0963.2
NC_013165:3146000:3150468315046831534282961Slackia heliotrinireducens DSM 20476, complete genomeexonuclease, DNA polymerase III, epsilon subunit family2e-0963.2
NC_017338:1234077:1236038123603812403544317Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeDNA polymerase III subunit alpha3e-0962.8
NC_015514:2414617:2418229241822924200911863Cellulomonas fimi ATCC 484 chromosome, complete genomeDNA polymerase III subunit epsilon3e-0962.8
NC_003909:3606177:3606177360617736090892913Bacillus cereus ATCC 10987, complete genomeDNA polymerase III, alpha subunit, Gram-positive type3e-0962.8
NC_017208:3816753:3829460382946038337614302Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA polymerase III PolC3e-0962.8
NC_015589:1899329:1899329189932919036064278Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeDNA polymerase III subunit alpha3e-0962.8
NC_011725:3821789:3834107383410738384084302Bacillus cereus B4264 chromosome, complete genomeDNA polymerase III PolC3e-0962.8
NC_014171:3701051:3713367371336737176684302Bacillus thuringiensis BMB171 chromosome, complete genomeDNA polymerase III PolC3e-0962.8
NC_004722:3777907:3790222379022237945294308Bacillus cereus ATCC 14579, complete genomeDNA polymerase III subunit alpha3e-0962.8
NC_012815:1465670:147019214701921470758567Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeDNA polymerase III alpha subunit3e-0962.4
NC_020453:896458:9170169170169191782163Agromonas oligotrophica S58 DNA, complete genomehypothetical protein3e-0962.4
NC_012814:1465738:147026014702601470826567Bifidobacterium animalis subsp. lactis Bl-04, complete genomeDNA polymerase III alpha subunit3e-0962.4
NC_017353:1699652:1711348171134817156644317Staphylococcus lugdunensis N920143, complete genomeDNA polymerase III PolC-type5e-0962
NC_014727:1292213:1315998131599813203354338Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA polymerase iii, alpha subunit (gram-positive type) (polc)5e-0962
NC_014335:3567931:3580242358024235845434302Bacillus cereus biovar anthracis str. CI chromosome, completeDNA polymerase III subunit alpha7e-0961.6
NC_005945:3615623:3630085363008536343864302Bacillus anthracis str. Sterne, complete genomeDNA polymerase III subunit alpha7e-0961.6
NC_007530:3616828:3629517362951736338184302Bacillus anthracis str. 'Ames Ancestor', complete genomeDNA polymerase III subunit alpha7e-0961.6
NC_006274:3697255:3709943370994337142444302Bacillus cereus E33L, complete genomeDNA polymerase III subunit alpha7e-0961.6
NC_003997:3617000:3629390362939036336914302Bacillus anthracis str. Ames, complete genomeDNA polymerase III subunit alpha7e-0961.6
NC_011773:3651963:3664276366427636685774302Bacillus cereus AH820 chromosome, complete genomeDNA polymerase III PolC7e-0961.6
NC_012581:559182:6048696048696091704302Bacillus anthracis str. CDC 684 chromosome, complete genomeDNA polymerase III PolC7e-0961.6
NC_012659:3617000:3629417362941736337184302Bacillus anthracis str. A0248, complete genomeDNA polymerase III PolC7e-0961.6
NC_005945:3359598:337683333768333377780948Bacillus anthracis str. Sterne, complete genomeDNA polymerase III subunit epsilon6e-0961.6
NC_013192:519600:5301375301375345164380Leptotrichia buccalis DSM 1135, complete genomeDNA polymerase III, alpha subunit6e-0961.6
NC_012121:897866:9022149022149065274314Staphylococcus carnosus subsp. carnosus TM300, complete genomehomolog of DNA polymerase III, alpha subunit1e-0861.2
NC_016779:3579743:3596109359610935990212913Bacillus cereus F837/76 chromosome, complete genomeDNA polymerase III subunit alpha8e-0961.2
NC_008600:3643905:3660271366027136631892919Bacillus thuringiensis str. Al Hakam, complete genomeDNA polymerase III, alpha subunit8e-0961.2
NC_012472:3661912:3678278367827836811902913Bacillus cereus 03BB102, complete genomeDNA polymerase III, PolC-type8e-0961.2
NC_021182:4829000:4832933483293348372764344Clostridium pasteurianum BC1, complete genomeDNA polymerase III, alpha chain1e-0860.8
NC_011898:513835:5162685162685205694302Clostridium cellulolyticum H10, complete genomeDNA polymerase III, alpha subunit1e-0860.8
NC_009674:2551759:2564124256412425684254302Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeDNA polymerase III PolC1e-0860.8
NC_013204:3613824:3619594361959436224942901Eggerthella lenta DSM 2243, complete genomeDNA polymerase III, epsilon subunit2e-0860.5
NC_015387:942974:942974942974943720747Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeDNA polymerase III, epsilon subunit2e-0860.1
NC_009782:1327340:1331601133160113359174317Staphylococcus aureus subsp. aureus Mu3, complete genomeDNA polymerase III alpha chain PolC-type2e-0860.1
NC_017341:1291583:1295844129584413001604317Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,DNA polymerase III subunit alpha2e-0860.1
NC_002952:1291444:1295705129570513000214317Staphylococcus aureus subsp. aureus MRSA252, complete genomeDNA polymerase III PolC-type2e-0860.1
NC_004461:921364:9423929423929467204329Staphylococcus epidermidis ATCC 12228, complete genomeDNA polymerase III, alpha chain PolC-type2e-0859.7
NC_014152:1430156:1433347143334714376754329Thermincola sp. JR, complete genomeDNA polymerase III, alpha subunit2e-0859.7
NC_012778:841934:8669008669008714414542Eubacterium eligens ATCC 27750, complete genomeDNA polymerase III subunit alpha, the Gram-positive type3e-0859.3
NC_017511:602000:602234602234603028795Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative DNA polymerase III subunit3e-0859.3
NC_013714:1048783:105428110542811054919639Bifidobacterium dentium Bd1, complete genomeDNA polymerase III, epsilon subunit6e-0858.5
NC_015671:1540860:1558211155821115600791869Cellvibrio gilvus ATCC 13127 chromosome, complete genomeDNA polymerase III subunit epsilon7e-0858.2
NC_007622:1214629:1218890121889012232064317Staphylococcus aureus RF122, complete genomeDNA polymerase III6e-0858.2
NC_014387:1175927:1178121117812111827104590Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeDNA polymerase III C PolC16e-0858.2
NC_015760:61345:7446974469788634395Streptococcus salivarius CCHSS3, complete genomeDNA polymerase III polC-type (PolIII)9e-0857.8
NC_007517:3430237:345016934501693450825657Geobacter metallireducens GS-15, complete genomeDNA polymerase III, epsilon subunit1e-0757.8
NC_014363:2035141:4254425472593006Olsenella uli DSM 7084 chromosome, complete genomeDNA polymerase III, epsilon subunit2e-0757
NC_011365:1969198:199197119919711992306336Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome2e-0757
NC_006448:59654:7279172791771854395Streptococcus thermophilus LMG 18311, complete genomeDNA polymerase III subunit alpha3e-0756.2
NC_006449:58436:7157471574759684395Streptococcus thermophilus CNRZ1066, complete genomeDNA polymerase III subunit alpha3e-0756.2
NC_014960:1697818:1714903171490317177072805Anaerolinea thermophila UNI-1, complete genomeDnaQ exonuclease/DinG helicase family protein3e-0755.8
NC_015222:2475792:2494021249402124954121392Nitrosomonas sp. AL212 chromosome, complete genomeDNA polymerase III, epsilon subunit4e-0755.8
NC_014151:2312000:2313921231392123158161896Cellulomonas flavigena DSM 20109 chromosome, complete genomeDNA polymerase III, epsilon subunit4e-0755.8
NC_008786:2687688:269100026910002691713714Verminephrobacter eiseniae EF01-2, complete genomeDNA polymerase III, epsilon subunit4e-0755.5
NC_015588:1965787:1967662196766219693981737Isoptericola variabilis 225 chromosome, complete genomeDNA polymerase III, epsilon subunit8e-0754.7
NC_015975:1056731:1056731105673110610804350Lactobacillus ruminis ATCC 27782 chromosome, complete genomeDNA polymerase III PolC8e-0754.7
NC_014727:2036340:205057920505792051475897Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA polymerase iii polc-type1e-0654.3
NC_013169:1661135:1661135166113516628891755Kytococcus sedentarius DSM 20547, complete genomeexonuclease, DNA polymerase III, epsilon subunit family1e-0653.9
NC_008314:2686851:270009027000902700752663Ralstonia eutropha H16 chromosome 2, complete sequenceputative exonuclease1e-0653.9
NC_015737:2146953:216048921604892161424936Clostridium sp. SY8519, complete genomeDNA polymerase III subunit alpha3e-0653.1
NC_009454:1462930:1466970146697014697832814Pelotomaculum thermopropionicum SI, complete genomehypothetical protein4e-0652.4