Pre_GI Gene

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Host: NC_013714 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013714:1048783 Bifidobacterium dentium Bd1, complete genome

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10487831049556774hypothetical proteinBLASTP
10505001050880381hypothetical proteinBLASTP
10514311052042612hypothetical protein
10525071052707201hypothetical protein
10527831053142360hypothetical protein
10533531053481129hypothetical protein
10535421054267726hypothetical protein
10542811054919639DNA polymerase III epsilon subunitQuickGO ontologyBLASTP
10552761055755480Single-strand DNA-binding proteinQuickGO ontologyBLASTP
10568851057553669hypothetical protein
10575901058090501hypothetical protein
105808710622714185TrwC relaxaseQuickGO ontologyBLASTP
10624271062741315hypothetical protein
10630201063592573hypothetical proteinBLASTP
106360410648031200Helix-turn-helix domain-containing proteinQuickGO ontology
10651061065318213hypothetical protein