Pre_GI Gene

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Host: NC_008313 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008313:2629281 Ralstonia eutropha H16 chromosome 1, complete sequence

Host Lineage: Cupriavidus necator; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain (ATCC 17699; H16), formerly Alcaligenes eutrophus was originally isolated from sludge. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation. Other strains have been studied for their ability to produce polyhydroxybutyrates which have industrial application. Another strain is able to attack other bacteria and fungi when nutrients in the soil are low.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
262824226292911050predicted membrane proteinQuickGO ontologyBLASTP
262928126303301050multidrug resistance efflux pumpQuickGO ontologyBLASTP
263042926319731545outer membrane heavy metal efflux proteinQuickGO ontologyBLASTP
263199226330951104predicted permeaseQuickGO ontologyBLASTP
263387126359102040two domain protein PF04304 and PF03401QuickGO ontologyBLASTP
26359122636883972probable extra-cytoplasmic solute receptorQuickGO ontologyBLASTP
26370282637957930transcriptional regulator LysR-familyQuickGO ontologyBLASTP
2638033263937913473-Carboxy-ciscis-muconate cyclo-isomeraseQuickGO ontologyBLASTP
263942726406171191predicted acyl-CoA transferasecarnitine dehydrataseQuickGO ontologyBLASTP
26406402641500861hypothetical proteinBLASTP
264163826427111074outer membrane protein porinQuickGO ontologyBLASTP
264374326450021260GGDEF domain proteinQuickGO ontologyBLASTP
2645411264548575tRNA-ProQuickGO ontology
26455812646324744hypothetical membrane associated proteincontains exonuclease domainQuickGO ontologyBLASTP
26465022647020519conserved hypothetical membrane spanning proteinQuickGO ontologyBLASTP