Pre_GI: BLASTP Hits

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Query: NC_014323:3195178:3213815 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 3213815, End: 3214234, Length: 420

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014540:2908912:291779329177932918215423Burkholderia sp. CCGE1003 chromosome 2, complete sequenceBiopolymer transport protein ExbD/TolR1e-33141
NC_007953:1088933:108965810896581090128471Burkholderia xenovorans LB400 chromosome 3, complete sequenceBiopolymer transport protein ExbD/TolR1e-23108
NC_011992:1505106:150908715090871509497411Acidovorax ebreus TPSY, complete genomeBiopolymer transport protein ExbD/TolR2e-1890.9
NC_014910:2585747:260199526019952602405411Alicycliphilus denitrificans BC chromosome, complete genomebiopolymer transport protein exbd/tolr3e-1890.5
NC_014118:2417838:243539924353992435824426Burkholderia sp. CCGE1002 chromosome chromosome 2, completeBiopolymer transport protein ExbD/TolR2e-1787.8
NC_011296:909558:929488929488929892405Thermodesulfovibrio yellowstonii DSM 11347, complete genomeTolR protein4e-1683.2
NC_011883:1601552:161353616135361613970435Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Biopolymer transport protein ExbD/TolR3e-1580.5
NC_006677:1391984:141283914128391413264426Gluconobacter oxydans 621H, complete genomeBiopolymer transport ExbD protein6e-1579.3
NC_009053:1785447:179758017975801797990411Actinobacillus pleuropneumoniae L20, complete genomebiopolymer transport ExbD protein7e-1475.9
NC_010939:1809446:182146818214681821878411Actinobacillus pleuropneumoniae serovar 7 str. AP76, completebiopolymer transport ExbD protein7e-1475.9
NC_010278:1749579:175830617583061758716411Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,biopolymer transport ExbD protein7e-1475.9
NC_004129:5481629:549889654988965499348453Pseudomonas fluorescens Pf-5, complete genomebiopolymer transport protein TolR1e-1375.5
NC_008011:860000:873921873921874355435Lawsonia intracellularis PHE/MN1-00, complete genomeBiopolymer transport protein2e-1374.3
NC_004578:4465247:448182944818294482293465Pseudomonas syringae pv. tomato str. DC3000, complete genometolR protein5e-1373.2
NC_014315:114151:138951138951139397447Nitrosococcus watsoni C-113 chromosome, complete genomeprotein TolR5e-1373.2
NC_011770:4763506:478338547833854783825441Pseudomonas aeruginosa LESB58, complete genomeTolR protein1e-1272
NC_008463:4566976:459652945965294596969441Pseudomonas aeruginosa UCBPP-PA14, complete genomeTolR protein1e-1272
NC_018080:4465618:448459944845994485039441Pseudomonas aeruginosa DK2 chromosome, complete genomeTolR protein1e-1272
NC_004556:1:122651226512684420Xylella fastidiosa Temecula1, complete genomebiopolymer transport ExbD1 protein1e-1272
NC_002516:1031386:105456610545661055006441Pseudomonas aeruginosa PAO1, complete genomeTolR protein1e-1272
NC_002488:1:122851228512707423Xylella fastidiosa 9a5c, complete genomebiopolymer transport ExbD1 protein2e-1271.2
NC_014118:2417838:243583424358342436265432Burkholderia sp. CCGE1002 chromosome chromosome 2, completeBiopolymer transport protein ExbD/TolR7e-1269.3
NC_016024:156000:161382161382161813432Candidatus Chloracidobacterium thermophilum B chromosome chromosomebiopolymer transport protein1e-1168.9
NC_010577:1:121561215612566411Xylella fastidiosa M23, complete genomeBiopolymer transport protein ExbD/TolR1e-1168.6
NC_007404:387827:389505389505389912408Thiobacillus denitrificans ATCC 25259, complete genomebiopolymer transport protein, ExbD/TolR family1e-1168.2
NC_011071:10842:128571285713270414Stenotrophomonas maltophilia R551-3, complete genomeBiopolymer transport protein ExbD/TolR5e-1166.6
NC_002977:2407392:242890124289012429305405Methylococcus capsulatus str. Bath, complete genomebiopolymer transport protein, ExbD/TolR family4e-1166.6
NC_010943:9294:126411264113054414Stenotrophomonas maltophilia K279a, complete genomeputative biopolymer transport ExbD2 protein5e-1166.2
NC_014733:107394:133229133229133636408Methylovorus sp. MP688 chromosome, complete genomebiopolymer transport protein exbd/tolr8e-1165.9
NC_005773:208000:230750230750231175426Pseudomonas syringae pv. phaseolicola 1448A, complete genomeTonB system transport protein ExbD12e-1064.3
NC_008340:277223:278226278226278675450Alkalilimnicola ehrlichei MLHE-1, complete genomeBiopolymer transport protein ExbD/TolR3e-1063.9
NC_010943:9294:122121221212637426Stenotrophomonas maltophilia K279a, complete genomeputative biopolymer transport ExbD1 protein4e-1063.5
NC_007613:2981829:300178030017803002205426Shigella boydii Sb227, complete genomeExbD4e-1063.5
NC_011071:10842:124281242812853426Stenotrophomonas maltophilia R551-3, complete genomeBiopolymer transport protein ExbD/TolR5e-1063.2
NC_010581:561579:582308582308582775468Beijerinckia indica subsp. indica ATCC 9039, complete genomeprotein TolR9e-1062
NC_014924:725380:750181750181750609429Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeprotein TolR3e-0960.5
NC_004088:3859173:387636138763613876792432Yersinia pestis KIM, complete genomeTonB-complex protein5e-0960.1
NC_003143:741169:745740745740746171432Yersinia pestis CO92, complete genomeExbD/TolR-family transport protein5e-0960.1
NC_010159:259695:276883276883277314432Yersinia pestis Angola, complete genometonB system transport protein ExbD5e-0960.1
NC_005810:3333000:333768233376823338113432Yersinia pestis biovar Microtus str. 91001, complete genomebiopolymer transport protein ExbD5e-0960.1
NC_009708:692508:697133697133697564432Yersinia pseudotuberculosis IP 31758 chromosome, complete genomebiopolymer transport protein ExbD5e-0960.1
NC_014029:792719:797284797284797715432Yersinia pestis Z176003 chromosome, complete genomeExbD/TolR-family transport protein5e-0960.1
NC_017154:734875:739446739446739877432Yersinia pestis D106004 chromosome, complete genomeExbD/TolR-family transport protein5e-0960.1
NC_017160:737000:741625741625742056432Yersinia pestis D182038 chromosome, complete genomeExbD/TolR-family transport protein5e-0960.1
NC_017168:341233:359131359131359562432Yersinia pestis A1122 chromosome, complete genomebiopolymer transport protein ExbD5e-0960.1
NC_017265:3724500:374172137417213742152432Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,membrane spanning protein in TonB-ExbB-ExbD complex5e-0960.1
NC_015224:3820338:385084438508443851269426Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,biopolymer transport protein ExbD4e-0960.1
NC_006155:3992818:401514240151424015567426Yersinia pseudotuberculosis IP 32953, complete genomeExbD/TolR-family transport protein5e-0959.7
NC_008150:3430000:344724334472433447668426Yersinia pestis Antiqua, complete genomeExbD/TolR-family transport protein5e-0959.7
NC_008149:650706:655283655283655708426Yersinia pestis Nepal516, complete genomeExbD/TolR-family transport protein5e-0959.7
NC_009381:522731:527308527308527733426Yersinia pestis Pestoides F chromosome, complete genomebiopolymer transport protein ExbD5e-0959.7
NC_010465:733916:737503737503737934432Yersinia pseudotuberculosis YPIII, complete genomeTonB system transport protein ExbD5e-0959.7
NC_010634:3905369:392659939265993927030432Yersinia pseudotuberculosis PB1/+, complete genomeTonB system transport protein ExbD5e-0959.7
NC_018012:1935500:195440119544011954844444Thiocystis violascens DSM 198 chromosome, complete genomecell division and transport-associated protein TolR1e-0858.5
NC_013209:2414500:242392024239202424369450Acetobacter pasteurianus IFO 3283-01, complete genomeExbD/TolR2e-0858.2
NC_017100:2414075:242512724251272425576450Acetobacter pasteurianus IFO 3283-03, complete genomeExbD/TolR2e-0858.2
NC_017108:2413000:242246424224642422913450Acetobacter pasteurianus IFO 3283-12, complete genomeExbD/TolR2e-0858.2
NC_017111:2413000:242248224224822422931450Acetobacter pasteurianus IFO 3283-32, complete genomeExbD/TolR2e-0858.2
NC_017121:2413000:242246924224692422918450Acetobacter pasteurianus IFO 3283-07, complete genomeExbD/TolR2e-0858.2
NC_017125:2415500:242510724251072425556450Acetobacter pasteurianus IFO 3283-22, complete genomeExbD/TolR2e-0858.2
NC_017146:2416000:242514924251492425598450Acetobacter pasteurianus IFO 3283-26, complete genomeExbD/TolR2e-0858.2
NC_014541:1280835:129824212982421298646405Ferrimonas balearica DSM 9799 chromosome, complete genomeouter membrane transport energization protein ExbD2e-0857.8
NC_002929:3568106:356810635681063568564459Bordetella pertussis Tohama I, complete genomeputative TolR-like translocation protein4e-0857
NC_008800:3955284:397258139725813973006426Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,biopolymer transport protein ExbD2e-0754.7
NC_012856:737170:758360758360758794435Ralstonia pickettii 12D chromosome 1, complete genomeprotein TolR3e-0753.9
NC_008783:177161:185469185469185927459Bartonella bacilliformis KC583, complete genomeTonB system transport protein ExbD3e-0753.9
NC_010682:701912:720524720524720958435Ralstonia pickettii 12J chromosome 1, complete sequenceprotein TolR4e-0753.5
NC_002488:1:127111271113121411Xylella fastidiosa 9a5c, complete genomebiopolymer transport ExbD2 protein4e-0753.5
NC_008228:3608909:361078436107843611185402Pseudoalteromonas atlantica T6c, complete genomeBiopolymer transport protein ExbD/TolR5e-0753.1
NC_010577:1:125731257312983411Xylella fastidiosa M23, complete genomeBiopolymer transport protein ExbD/TolR6e-0752.8
NC_004556:1:126911269113101411Xylella fastidiosa Temecula1, complete genomebiopolymer transport ExbD2 protein6e-0752.8
NC_014311:2733897:273631027363102736744435Ralstonia solanacearum PSI07 chromosome, complete genomeprotein tolR, component of the tol-pal system7e-0752.8
NC_008783:145305:159281159281159733453Bartonella bacilliformis KC583, complete genomeprotein TolR2e-0651.2
NC_002977:652481:668848668848669273426Methylococcus capsulatus str. Bath, complete genomebiopolymer transport protein, ExbD/TolR family2e-0651.2
NC_020409:77414:792397923979649411Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeBiopolymer transport protein exbD23e-0650.8
NC_008781:3056407:307737830773783077812435Polaromonas naphthalenivorans CJ2, complete genomeBiopolymer transport protein ExbD/TolR3e-0650.8
NC_014217:800406:801486801486802025540Starkeya novella DSM 506 chromosome, complete genomeTonB system transport protein ExbD5e-0649.7
NC_012440:373863:380844380844381248405Persephonella marina EX-H1, complete genomebiopolymer transport protein ExbD5e-0649.7