Pre_GI: BLASTP Hits

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Query: NC_013716:357928:402955 Citrobacter rodentium ICC168, complete genome

Start: 402955, End: 403491, Length: 537

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009792:4693152:470558347055834706140558Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-21101
NC_008321:2649781:267446526744652675013549Shewanella sp. MR-4, complete genomeFimbrial protein4e-1890.9
NC_007946:4779745:480636048063604806908549Escherichia coli UTI89, complete genomeputative F17-like fimbrial subunit7e-1890.1
NC_008253:3941938:396511039651103965661552Escherichia coli 536, complete genomeF17 fimbrial protein precursor3e-1788.2
NC_014561:76931:932619326193791531Pantoea vagans C9-1 plasmid pPag1, complete sequenceType-1 fimbrial protein, A chain precursor8e-1786.7
NC_013282:1256769:126981612698161270346531Cronobacter turicensis, complete genomeF17 fimbrial protein2e-1168.9
NC_015563:733704:746274746274746861588Delftia sp. Cs1-4 chromosome, complete genomeFimbrial protein domain-containing protein7e-1166.6
NC_010002:6590081:660594966059496606536588Delftia acidovorans SPH-1, complete genomeFimbrial protein8e-1166.6
NC_014306:2442471:245096124509612451524564Erwinia billingiae Eb661, complete genomeFimbrial protein4e-0960.8
NC_012721:137046:149529149529150077549Burkholderia glumae BGR1 chromosome 2, complete genomeFimbrial protein2e-0858.5
NC_014562:1402863:141089014108901411435546Pantoea vagans C9-1 chromosome, complete genomeMinor fimbrial subunit hifD precursor5e-0857.4
NC_013941:1314158:133200113320011332561561Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeFimbrial protein7e-0857
NC_013008:1271621:128987612898761290436561Escherichia coli O157:H7 str. TW14359 chromosome, complete genomepilin subunit7e-0857
NC_011353:1271335:128959012895901290150561Escherichia coli O157:H7 str. EC4115 chromosome, complete genomefimbrial protein7e-0857
NC_002655:1413244:143108914310891431649561Escherichia coli O157:H7 EDL933, complete genomeputative pilin subunit7e-0857
NC_002695:1329472:134731713473171347877561Escherichia coli O157:H7 str. Sakai, complete genomeputative major pilin protein7e-0857
NC_009648:293052:300128300128300664537Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative fimbriae; major subunit1e-0756.2
NC_012721:137046:153938153938154474537Burkholderia glumae BGR1 chromosome 2, complete genomeP pilus assembly protein, pilin FimA1e-0756.2
NC_011149:361765:367187367187367723537Salmonella enterica subsp. enterica serovar Agona str. SL483,fimbrial protein1e-0755.8
NC_016832:2581145:259321225932122593748537Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-0755.5
NC_011205:371001:387794387794388330537Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853fimbrial protein2e-0755.5
NC_011147:2463299:247535524753552475891537Salmonella enterica subsp. enterica serovar Paratyphi A strfimbrial protein2e-0755.5
NC_006511:2467763:247981924798192480355537Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCprobable fimbrial protein2e-0755.5
NC_004631:2584244:259631125963112596847537Salmonella enterica subsp. enterica serovar Typhi Ty2, completeprobable fimbrial protein2e-0755.5
NC_003198:378844:384266384266384802537Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable fimbrial protein2e-0755.5
NC_010694:436500:452372452372452926555Erwinia tasmaniensis, complete genomeFimbrial protein2e-0755.1
NC_016831:2627515:263963626396362640172537Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative fimbrial protein3e-0754.7
NC_010102:2721374:273349927334992734035537Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0754.7
NC_011094:380428:397173397173397709537Salmonella enterica subsp. enterica serovar Schwarzengrund strfimbrial protein major subunit3e-0754.7
NC_003197:367430:384403384403384939537Salmonella typhimurium LT2, complete genomeputative fimbrial major subunit3e-0754.7
NC_011083:403022:431530431530432066537Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,fimbrial protein3e-0754.7
NC_006905:401154:428942428942429478537Salmonella enterica subsp. enterica serovar Choleraesuis strputative fimbriae; major subunit3e-0754.7
NC_011274:376970:382392382392382928537Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91fimbrial protein3e-0754.7
NC_011294:346915:363708363708364244537Salmonella enterica subsp. enterica serovar Enteritidis strfimbrial protein3e-0754.7
NC_012125:373630:379052379052379588537Salmonella enterica subsp. enterica serovar Paratyphi C strainfimbrial protein3e-0754.7
NC_016810:366908:383887383887384423537Salmonella enterica subsp. enterica serovar Typhimurium strfimbrial protein3e-0754.7
NC_016856:365665:385094385094385630537Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative fimbrial major subunit3e-0754.7
NC_016857:366908:383887383887384423537Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative fimbrial major subunit3e-0754.7
NC_016863:367404:384383384383384919537Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative fimbrial major subunit3e-0754.7
NC_017046:366905:383884383884384420537Salmonella enterica subsp. enterica serovar Typhimurium str. 798fimbrial protein3e-0754.7
NC_015224:1914833:193535819353581935873516Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,fimbrial protein1e-0652.8
NC_007435:1914375:194863619486361949181546Burkholderia pseudomallei 1710b chromosome II, complete sequencefrimbrial protein2e-0652.4
NC_006351:101500:110182110182110727546Burkholderia pseudomallei K96243 chromosome 2, complete sequencefimbrial protein2e-0652.4
NC_007613:4403070:442206644220664422569504Shigella boydii Sb227, complete genomefimbrial morphology1e-0652.4
NC_016822:4889656:491030649103064910809504Shigella sonnei 53G, complete genomeminor component of type 1 fimbriae2e-0652
NC_011742:4873351:489110848911084891611504Escherichia coli S88 chromosome, complete genomeminor component of type 1 fimbriae2e-0652
NC_009801:4882684:490530449053044905807504Escherichia coli E24377A, complete genomeprotein fimG2e-0652
NC_002695:5381576:540317654031765403679504Escherichia coli O157:H7 str. Sakai, complete genomeFimG3e-0651.6
CP002185:4791811:481072648107264811229504Escherichia coli W, complete genomeputative fimbrial subunit protein3e-0651.6
CP002516:4199133:420164142016414202144504Escherichia coli KO11, complete genomeFimbrial protein domain-containing protein3e-0651.6
NC_011353:5455224:547682454768245477327504Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein fimG3e-0651.6
NC_013008:5411285:543288554328855433388504Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeminor subunit of type 1 fimbriae3e-0651.6
NC_013361:5580741:559680055968005597303504Escherichia coli O26:H11 str. 11368 chromosome, complete genomeminor component FimG of type 1 fimbriae3e-0651.6
NC_013941:5219841:524145752414575241960504Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeFimG3e-0651.6
NC_016902:4199133:420164142016414202144504Escherichia coli KO11FL chromosome, complete genomefimbrial protein domain-containing protein3e-0651.6
NC_011750:4978000:499573849957384996241504Escherichia coli IAI39 chromosome, complete genomeminor component of type 1 fimbriae3e-0651.6
AC_000091:4534935:455296545529654553468504Escherichia coli W3110 DNA, complete genomeminor component of type 1 fimbriae3e-0651.2
NC_008258:4345400:434632243463224346825504Shigella flexneri 5 str. 8401, complete genomefimbrial morphology3e-0651.2
NC_004741:4364235:436675143667514367254504Shigella flexneri 2a str. 2457T, complete genomeminor fimbrial subunit, precursor polypeptide3e-0651.2
NC_004431:5123325:514301551430155143518504Escherichia coli CFT073, complete genomeFimG protein precursor4e-0651.2
NC_011751:5070597:508764450876445088147504Escherichia coli UMN026 chromosome, complete genomeminor component of type 1 fimbriae4e-0651.2
NC_000913:4528278:454630845463084546811504Escherichia coli K12, complete genomeminor component of type 1 fimbriae3e-0651.2
NC_004337:4374500:437565543756554376158504Shigella flexneri 2a str. 301, complete genomeminor fimbrial subunit, precursor polypeptide3e-0651.2
NC_012759:4467288:448479344847934485296504Escherichia coli BW2952 chromosome, complete genomeminor component of type 1 fimbriae3e-0651.2
NC_012947:3883484:388440638844063884909504Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial protein3e-0651.2
NC_012967:4510393:452919945291994529702504Escherichia coli B str. REL606 chromosome, complete genomeminor component of type 1 fimbriae3e-0651.2
NC_013364:5255700:527974652797465280249504Escherichia coli O111:H- str. 11128, complete genomeminor component FimG of type 1 fimbriae3e-0651.2
NC_008253:4817864:485352248535224854025504Escherichia coli 536, complete genomeFimG protein precursor3e-0651.2
NC_010498:4930649:495290849529084953411504Escherichia coli SMS-3-5, complete genomeprotein fimG4e-0650.8
NC_007946:4875997:491303249130324913535504Escherichia coli UTI89, complete genometype 1 fimbriae minor subunit precursor FimG4e-0650.8
NC_008463:5313527:531352753135275314075549Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative fimbrial protein precursor6e-0650.4
NC_011741:4570498:460892746089274609430504Escherichia coli IAI1 chromosome, complete genomeminor component of type 1 fimbriae7e-0650.1
CU928160:4570498:460892746089274609430504Escherichia coli IAI1 chromosome, complete genomeminor component of type 1 fimbriae7e-0650.1
CP002797:4656327:467625046762504676753504Escherichia coli NA114, complete genomeFimbrial protein FimG9e-0649.7