Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:1314158 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
131415813154831326Biofilm PGA synthesis N-glycosyltransferase pgaCQuickGO ontologyBLASTP
131750213199252424Biofilm PGA synthesis protein pgaA precursorQuickGO ontologyBLASTP
132196713235771611Rtn-like proteinQuickGO ontologyBLASTP
13236791324170492hypothetical proteinBLASTP
13241751324987813hypothetical proteinBLASTP
132566613264577922-deoxy-D-gluconate 3-dehydrogenaseQuickGO ontologyBLASTP
13266031327292690chaperone proteinQuickGO ontologyBLASTP
132728913286231335hypothetical proteinBLASTP
132863913311612523outer membrane usher proteinQuickGO ontologyBLASTP
13312141331936723Gram-negative pili assembly chaperoneQuickGO ontologyBLASTP
13320011332561561Fimbrial proteinQuickGO ontologyBLASTP
13326041333227624hypothetical proteinBLASTP
13334961333606111hypothetical proteinBLASTP
13340681334187120hypothetical proteinBLASTP
133461813384303813Hemagglutininhemolysin-related proteinQuickGO ontologyBLASTP
133851913401381620outer membrane transporter of ShlAHecAFhaA exoprotein familyQuickGO ontologyBLASTP