Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:1271335 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12713351271748414PGA biosynthesis proteinQuickGO ontologyBLASTP
127175012729881239N-glycosyltransferaseQuickGO ontologyBLASTP
127306812750862019outer membrane N-deacetylaseQuickGO ontologyBLASTP
127509512775182424outer membrane protein PgaAQuickGO ontologyBLASTP
127803312794631431diguanylate cyclaseQuickGO ontologyBLASTP
127965712811711515cyclic diguanylate phosphodiesterase EAL domain-containing proteinQuickGO ontologyBLASTP
12812731281764492hypothetical proteinBLASTP
12817691282581813transcriptional regulatorQuickGO ontologyBLASTP
128326912840517832-deoxy-D-gluconate 3-dehydrogenaseQuickGO ontologyBLASTP
12841971284886690pili assembly chaperoneQuickGO ontologyBLASTP
128488312860671185outer membrane proteinQuickGO ontologyBLASTP
12888031289504702pili assembly chaperoneQuickGO ontologyBLASTP
12895901290150561fimbrial proteinQuickGO ontologyBLASTP
12901931290570378hypothetical proteinBLASTP
12911581291304147hypothetical proteinBLASTP
12919981292150153hypothetical proteinBLASTP
129220712960193813hypothetical proteinBLASTP