Pre_GI Gene

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Host: NC_011205 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011205:371001 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3710013722481248gamma-glutamyl phosphate reductaseQuickGO ontologyBLASTP
37236437243976tRNA-ThrQuickGO ontologyBLASTP
372687373214528transposaseQuickGO ontologyBLASTP
373211373510300IS3 transposase OrfAQuickGO ontologyBLASTP
374299374451153hypothetical proteinBLASTP
3747993760311233permeaseQuickGO ontologyBLASTP
3761633775841422isopropylmalate isomerase large subunitQuickGO ontologyBLASTP
3775863782126273-isopropylmalate dehydratase small subunitQuickGO ontologyBLASTP
3782273791058795-oxopent-3-ene-125-tricarboxylate decarboxylaseQuickGO ontologyBLASTP
379105380019915haloacetate dehalogenase H-1QuickGO ontologyBLASTP
380053381018966LysR family transcriptional regulatorQuickGO ontologyBLASTP
382169382324156outer membrane proteinQuickGO ontologyBLASTP
382372383130759fimbrial chaperone proteinQuickGO ontologyBLASTP
3830963844211326fimbrial usherQuickGO ontologyBLASTP
3844263869872562outer membrane fimbrial usher proteinQuickGO ontologyBLASTP
386971387732762fimbrial chaperone proteinQuickGO ontologyBLASTP
387794388330537fimbrial proteinQuickGO ontologyBLASTP
389282389728447transmembrane regulatorQuickGO ontologyBLASTP