Pre_GI Gene

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Host: NC_011147 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011147:2463299 Salmonella enterica subsp. enterica serovar Paratyphi A str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
246329924652571959type III restriction-modification system StyLTI enzyme modQuickGO ontologyBLASTP
246544624666991254metabolite transport proteinQuickGO ontologyBLASTP
24668932467360468hypothetical proteinBLASTP
24679422468301360lipoproteinQuickGO ontologyBLASTP
24683592468583225hypothetical proteinBLASTP
24685942469235642transcriptional regulatorQuickGO ontologyBLASTP
24693792469903525outer membrane proteinQuickGO ontologyBLASTP
24703042470792489hypothetical proteinBLASTP
24708252471508684transmembrane regulatorQuickGO ontologyBLASTP
247160824731581551rtn proteinQuickGO ontologyBLASTP
24734842473984501hypothetical proteinBLASTP
24739572474691735transmembrane regulatorQuickGO ontologyBLASTP
24753552475891537fimbrial proteinQuickGO ontologyBLASTP
24759532476714762fimbrial chaperone proteinQuickGO ontologyBLASTP
247669824792592562outer membrane fimbrial usher proteinQuickGO ontologyBLASTP
247926424805891326fimbrial proteinQuickGO ontologyBLASTP
24805552481313759fimbrial chaperone proteinQuickGO ontologyBLASTP
24813602481758399hypothetical proteinBLASTP
24823162482678363bactoprenol-linked glucose translocaseQuickGO ontologyBLASTP
24826752483607933O-antigen conversion bactoprenyl transferaseQuickGO ontologyBLASTP
248359724850541458O-antigen conversion translocaseQuickGO ontologyBLASTP
248511324871162004tailspikeQuickGO ontologyBLASTP