Pre_GI Gene

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Host: NC_012125 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012125:373630 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
373630374331702fimbrial chaperone proteinQuickGO ontologyBLASTP
3743543756551302fimbrial proteinQuickGO ontologyBLASTP
3756843782452562outer membrane fimbrial usher proteinQuickGO ontologyBLASTP
378229378990762fimbrial chaperone proteinQuickGO ontologyBLASTP
379052379588537fimbrial proteinQuickGO ontologyBLASTP
380252380986735transmembrane regulatorQuickGO ontologyBLASTP
380959381459501periplasmic proteinQuickGO ontologyBLASTP
3817593833331575rtn proteinQuickGO ontologyBLASTP
383397384176780transmembrane regulatorQuickGO ontologyBLASTP
384149384637489hypothetical proteinBLASTP
385705386346642response regulatorQuickGO ontologyBLASTP
386402386581180hypothetical proteinBLASTP
386639386998360lipoproteinQuickGO ontologyBLASTP
3870683885251458outer membrane efflux-like proteinQuickGO ontologyBLASTP
3885423917093168cation efflux system proteinQuickGO ontologyBLASTP
3917063929111206cation efflux pumpQuickGO ontologyBLASTP
3932093954972289cation transport ATPaseQuickGO ontologyBLASTP
395509395973465transcriptional regulatorQuickGO ontologyBLASTP
396051396245195copper chaperoneQuickGO ontologyBLASTP