Pre_GI: BLASTP Hits

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Query: NC_013716:1298932:1306464 Citrobacter rodentium ICC168, complete genome

Start: 1306464, End: 1306733, Length: 270

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:4990365:499591349959134996182270Escherichia coli O111:H- str. 11128, complete genomehypothetical protein4e-45179
NC_013008:1761165:177869817786981778967270Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail fiber protein4e-45179
NC_011353:1761977:177972217797221779991270Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage tail fiber C-terminus family protein4e-45179
NC_002695:3468873:348025634802563480645390Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-44178
AP010958:1305712:131215113121511312420270Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein2e-44177
NC_013353:1305712:131215113121511312420270Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-44177
NC_013361:3597812:361437736143773614646270Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-44177
NC_011353:3573641:358436435843643584633270Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage tail fiber C-terminus family protein1e-44177
NC_013008:3525428:353924135392413539510270Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-44177
NC_002695:2158314:216083221608322161101270Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-44176
NC_013941:1014386:102116710211671021475309Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeprophage tail fiber family protein8e-44175
NC_002695:2655445:267069026706902670959270Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein8e-44175
NC_011353:2563056:257830125783012578570270Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage tail fiber C-terminus family protein8e-44175
NC_013008:2561586:257728125772812577550270Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail fiber protein8e-44175
AP010958:2272919:228672822867282286997270Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein7e-44175
NC_013353:2272919:228672822867282286997270Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein7e-44175
NC_013361:1754346:176181617618161762085270Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-43174
AP010958:2134556:214552321455232145792270Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein1e-43174
NC_013353:2134556:214552321455232145792270Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-43174
NC_011601:756885:767281767281767550270Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein3e-43173
NC_013353:1472506:148859114885911488860270Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein5e-43172
AP010958:1472506:148859114885911488860270Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein5e-43172
NC_013364:1477248:148370014837001483969270Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-42171
NC_002695:1794635:180024518002451800514270Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein9e-43171
NC_002655:2264773:228666322866632286932270Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by cryptic prophage CP-933P9e-43171
NC_011353:1716037:172183617218361722105270Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage tail fiber C-terminus family protein9e-43171
NC_013008:1715831:172081117208111721080270Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein9e-43171
NC_002695:2893951:289676728967672897075309Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-42169
NC_013361:2169948:217241821724182172687270Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-41167
NC_011601:1077548:108401910840191084288270Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein2e-41167
NC_013361:1593543:160915916091591609428270Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein6e-41166
AP010958:867869:874013874013874282270Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein5e-41166
NC_013353:867869:874013874013874282270Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein5e-41166
NC_011353:921500:927540927540927809270Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage tail fiber C-terminus family protein4e-41166
NC_013364:1997891:201195120119512012220270Escherichia coli O111:H- str. 11128, complete genomehypothetical protein4e-41166
NC_013364:2522888:253751125375112537780270Escherichia coli O111:H- str. 11128, complete genomehypothetical protein4e-41166
NC_002655:919654:925787925787926095309Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933K3e-41166
NC_002695:917509:924136924136924444309Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-41166
NC_013008:918215:929094929094929402309Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein3e-41166
NC_013364:3312379:331742733174273317696270Escherichia coli O111:H- str. 11128, complete genomehypothetical protein3e-40163
NC_013361:1896446:191487919148791915148270Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein6e-40162
NC_011601:1466496:147206714720671472336270Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-39161
NC_013364:863209:881774881774882043270Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-39161
NC_002655:1909139:192736919273691927638270Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933O4e-39159
NC_011353:1195179:121374912137491214018270Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage tail fiber C-terminus family protein4e-39159
NC_013008:2889743:289255928925592892828270Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein4e-39159
NC_011353:2892265:289226528922652892534270Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage tail fiber C-terminus family protein4e-39159
NC_002655:2730659:274604827460482746317270Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933U4e-38156
NC_013716:1756545:176464617646461764858213Citrobacter rodentium ICC168, complete genome1e-24111