Pre_GI: BLASTP Hits

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Query: NC_013714:2086526:2148952 Bifidobacterium dentium Bd1, complete genome

Start: 2148952, End: 2149197, Length: 246

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013715:1907503:192891419289141929150237Rothia mucilaginosa DY-18, complete genomeribosomal protein L283e-1787
NC_009142:827912:847058847058847294237Saccharopolyspora erythraea NRRL 2338, complete genome50S ribosomal protein L287e-1785.9
NC_007947:290864:307391307391307627237Methylobacillus flagellatus KT, complete genomeribosomal protein L282e-1581.3
NC_012968:381771:393023393023393259237Methylotenera mobilis JLW8, complete genomeribosomal protein L281e-1478.2
NC_013416:386301:398752398752398988237Aggregatibacter actinomycetemcomitans D11S-1, complete genome50S ribosomal protein L282e-1478.2
NC_012913:2189862:219413621941362194372237Aggregatibacter aphrophilus NJ8700, complete genomeribosomal protein L282e-1477.8
NC_011901:342777:366972366972367208237Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete50S ribosomal protein L282e-1477.8
NC_016745:675909:678031678031678267237Oceanimonas sp. GK1 chromosome, complete genome50S ribosomal protein L284e-1476.6
NC_009565:2306574:232943723294372329673237Mycobacterium tuberculosis F11, complete genome50S ribosomal protein L28 rpmB22e-1374.7
NC_016804:2254979:227784222778422278078237Mycobacterium bovis BCG str. Mexico chromosome, complete genome50S ribosomal protein L282e-1374.7
NC_017026:2286000:230814623081462308382237Mycobacterium tuberculosis RGTB327 chromosome, complete genome50S ribosomal protein L282e-1374.7
NC_018507:115346:122728122728122943216Candidatus Portiera aleyrodidarum BT-B chromosome, complete genome50S ribosomal protein L282e-1374.3
NC_018677:111500:116295116295116510216Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeLSU ribosomal protein L28p2e-1374.3
NC_008260:228475:233902233902234138237Alcanivorax borkumensis SK2, complete genomeribosomal protein L285e-1373.2
NC_017986:2548720:255411325541132554349237Pseudomonas putida ND6 chromosome, complete genome50S ribosomal protein L281e-1272
NC_008786:1936626:195706319570631957296234Verminephrobacter eiseniae EF01-2, complete genomeribosomal protein L282e-1271.2
NC_013961:73037:103619103619103855237Erwinia amylovora, complete genome50S ribosomal protein L282e-1270.9
NC_013971:73037:103619103619103855237Erwinia amylovora ATCC 49946 chromosome, complete genome50S ribosomal protein L282e-1270.9
NC_016860:3925500:394512239451223945358237Salmonella enterica subsp. enterica serovar Typhimurium str50S ribosomal protein L286e-1269.7
NC_016863:3864000:388352538835253883761237Salmonella enterica subsp. enterica serovar Typhimurium str. UK-150S ribosomal protein L286e-1269.7
NC_015422:3836911:385705038570503857283234Alicycliphilus denitrificans K601 chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_010498:4031500:404945940494594049695237Escherichia coli SMS-3-5, complete genomeribosomal protein L285e-1269.7
NC_010658:3774110:379426037942603794496237Shigella boydii CDC 3083-94, complete genomeribosomal protein L285e-1269.7
NC_004431:4223232:424243642424364242672237Escherichia coli CFT073, complete genome50S ribosomal protein L285e-1269.7
CP002185:3998112:401730740173074017543237Escherichia coli W, complete genome50S ribosomal subunit protein L285e-1269.7
NC_002655:4606000:462428046242804624516237Escherichia coli O157:H7 EDL933, complete genome50S ribosomal protein L285e-1269.7
AP010958:4668181:466906646690664669302237Escherichia coli O103:H2 str. 12009 DNA, complete genome50S ribosomal subunit protein L285e-1269.7
NC_010468:80000:801018010180337237Escherichia coli ATCC 8739, complete genomeribosomal protein L285e-1269.7
CU928160:3862935:388212138821213882357237Escherichia coli IAI1 chromosome, complete genome50S ribosomal subunit protein L285e-1269.7
CP002516:88500:885308853088766237Escherichia coli KO11, complete genomeribosomal protein L285e-1269.7
CU928145:4167043:418646041864604186696237Escherichia coli 55989 chromosome, complete genome50S ribosomal subunit protein L285e-1269.7
NC_010473:3883701:390703839070383907274237Escherichia coli str. K-12 substr. DH10B, complete genome50S ribosomal subunit protein L285e-1269.7
NC_016857:3924000:394354139435413943777237Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7450S ribosomal protein L286e-1269.7
NC_016856:3916500:393591839359183936154237Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S50S ribosomal protein L286e-1269.7
NC_016810:3923988:394354039435403943776237Salmonella enterica subsp. enterica serovar Typhimurium str50S ribosomal protein L286e-1269.7
NC_003197:3902500:392222639222263922462237Salmonella typhimurium LT2, complete genome50S ribosomal protein L286e-1269.7
NC_004631:3910451:391133439113343911570237Salmonella enterica subsp. enterica serovar Typhi Ty2, complete50S ribosomal protein L286e-1269.7
NC_003198:3924952:392583539258353926071237Salmonella enterica subsp. enterica serovar Typhi str. CT18,50S ribosomal protein L286e-1269.7
NC_011149:3822000:384159338415933841829237Salmonella enterica subsp. enterica serovar Agona str. SL483,ribosomal protein L286e-1269.7
NC_006905:3845000:386452638645263864762237Salmonella enterica subsp. enterica serovar Choleraesuis str50S ribosomal protein L286e-1269.7
NC_006511:3690828:371088537108853711121237Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC50S ribosomal protein L286e-1269.7
NC_011080:3875320:389537738953773895613237Salmonella enterica subsp. enterica serovar Newport str. SL254,ribosomal protein L286e-1269.7
NC_011094:3778000:379831237983123798548237Salmonella enterica subsp. enterica serovar Schwarzengrund str50S ribosomal protein L286e-1269.7
NC_011147:3686500:370655537065553706791237Salmonella enterica subsp. enterica serovar Paratyphi A str50S ribosomal protein L286e-1269.7
NC_011205:3942500:396192739619273962163237Salmonella enterica subsp. enterica serovar Dublin str. CT_0202185350S ribosomal protein L286e-1269.7
NC_011274:3894387:389527038952703895506237Salmonella enterica subsp. enterica serovar Gallinarum str. 287/9150S ribosomal protein L286e-1269.7
NC_011294:3782655:380333038033303803566237Salmonella enterica subsp. enterica serovar Enteritidis str50S ribosomal protein L286e-1269.7
NC_012125:3840000:385938138593813859617237Salmonella enterica subsp. enterica serovar Paratyphi C strain50S ribosomal protein L286e-1269.7
NC_011083:3915500:393523639352363935472237Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,ribosomal protein L286e-1269.7
NC_004741:3992384:399326939932693993505237Shigella flexneri 2a str. 2457T, complete genome50S ribosomal protein L285e-1269.7
NC_010830:718614:735533735533735784252Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein5e-1269.7
NC_011741:3862935:388212138821213882357237Escherichia coli IAI1 chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_011742:3998285:401748940174894017725237Escherichia coli S88 chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_011745:4226186:424560242456024245838237Escherichia coli ED1a chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_012759:3675396:369778736977873698023237Escherichia coli BW2952 chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_012967:3729813:374979337497933750029237Escherichia coli B str. REL606 chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_013008:4595043:461444246144424614678237Escherichia coli O157:H7 str. TW14359 chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_013353:4668181:466906646690664669302237Escherichia coli O103:H2 str. 12009, complete genome50S ribosomal protein L285e-1269.7
NC_013361:4991020:499190549919054992141237Escherichia coli O26:H11 str. 11368 chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_013364:4460500:447883944788394479075237Escherichia coli O111:H- str. 11128, complete genome50S ribosomal protein L285e-1269.7
NC_013941:4427000:444524244452424445478237Escherichia coli O55:H7 str. CB9615 chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_016822:4093000:409306840930684093304237Shigella sonnei 53G, complete genome50S ribosomal protein L285e-1269.7
NC_016902:88500:885308853088766237Escherichia coli KO11FL chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_017328:3794105:381395238139523814188237Shigella flexneri 2002017 chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_011601:4036590:405780840578084058044237Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_011415:4040211:405962840596284059864237Escherichia coli SE11 chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_011353:4639002:465840146584014658637237Escherichia coli O157:H7 str. EC4115 chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_009801:4108179:412737441273744127610237Escherichia coli E24377A, complete genomeribosomal protein L285e-1269.7
NC_004337:3761865:378175237817523781988237Shigella flexneri 2a str. 301, complete genome50S ribosomal protein L285e-1269.7
NC_011748:4167043:418646041864604186696237Escherichia coli 55989, complete genome50S ribosomal protein L285e-1269.7
NC_002695:4537000:455529745552974555533237Escherichia coli O157:H7 str. Sakai, complete genome50S ribosomal protein L285e-1269.7
NC_009800:3821824:384101938410193841255237Escherichia coli HS, complete genomeribosomal protein L285e-1269.7
NC_004337:3590323:378175237817523781988237Shigella flexneri 2a str. 301, complete genome50S ribosomal protein L285e-1269.7
NC_011750:4307166:432635843263584326594237Escherichia coli IAI39 chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_008253:3896704:391590839159083916144237Escherichia coli 536, complete genome50S ribosomal protein L285e-1269.7
NC_007606:3784847:380370738037073803943237Shigella dysenteriae Sd197, complete genome50S ribosomal subunit protein L285e-1269.7
NC_011740:4007000:402814940281494028385237Escherichia fergusonii ATCC 35469, complete genome50S ribosomal subunit protein L285e-1269.7
NC_000913:3786124:380946138094613809697237Escherichia coli K12, complete genome50S ribosomal protein L285e-1269.7
AC_000091:3827856:382874138287413828977237Escherichia coli W3110 DNA, complete genome50S ribosomal subunit protein L285e-1269.7
NC_011751:4251296:427071642707164270952237Escherichia coli UMN026 chromosome, complete genome50S ribosomal protein L285e-1269.7
NC_007946:4050762:406996640699664070202237Escherichia coli UTI89, complete genome50S ribosomal subunit protein L285e-1269.7
NC_013421:4790696:481174548117454811981237Pectobacterium wasabiae WPP163, complete genomeribosomal protein L288e-1268.9
NC_004547:164000:167881167881168117237Erwinia carotovora subsp. atroseptica SCRI1043, complete genome50S ribosomal protein L281e-1168.9
NC_016816:127802:147302147302147538237Pantoea ananatis LMG 5342, complete genome50S ribosomal protein L281e-1168.6
NC_007912:4661141:466349746634974663733237Saccharophagus degradans 2-40, complete genome50S ribosomal subunit protein L281e-1168.6
NC_013850:109500:128052128052128288237Klebsiella variicola At-22 chromosome, complete genomeribosomal protein L281e-1168.6
NC_011283:105245:122856122856123092237Klebsiella pneumoniae 342 chromosome, complete genome50S ribosomal protein L281e-1168.6
NC_018691:198909:203837203837204073237Alcanivorax dieselolei B5 chromosome, complete genome50S ribosomal protein L281e-1168.6
NC_007613:3637832:365703636570363657272237Shigella boydii Sb227, complete genome50S ribosomal subunit protein L282e-1167.8
NC_006576:1551939:157979215797921580028237Synechococcus elongatus PCC 6301, complete genome50S ribosomal protein L282e-1064.3
NC_019745:3217552:323754832375483237784237Gloeocapsa sp. PCC 7428, complete genome50S ribosomal protein L283e-1063.9
NC_008319:1272251:127933712793371279573237Synechococcus sp. CC9311, complete genomeribosomal protein L282e-0961.2
NC_009481:1109324:112841111284111128647237Synechococcus sp. WH 7803 chromosome, complete genome50S ribosomal protein L283e-0960.8
NC_016845:5162481:516248151624815162681201Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,50S ribosomal protein L282e-0858.2
NC_010102:3851500:387117338711733871373201Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0857.8
NC_016831:3875134:387605338760533876253201Salmonella enterica subsp. enterica serovar Gallinarum/pullorum50S ribosomal protein L282e-0857.8
NC_016832:3900000:390016739001673900367201Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,50S ribosomal protein L282e-0857.8
NC_017046:3923000:394236739423673942567201Salmonella enterica subsp. enterica serovar Typhimurium str. 79850S ribosomal protein L282e-0857.8
NC_016513:689689:702141702141702314174Aggregatibacter actinomycetemcomitans ANH9381 chromosome, complete50S ribosomal protein L283e-0857
NC_010793:1811401:181163518116351811922288Orientia tsutsugamushi str. Ikeda, complete genome50S ribosomal protein L281e-0755.1
NC_005042:830000:847533847533847781249Prochlorococcus marinus subsp. marinus str. CCMP1375, complete50S ribosomal protein L282e-0754.3
NC_014499:63365:682266822668447222Candidatus Sulcia muelleri CARI chromosome, complete genome50S ribosomal subunit protein L286e-0649.7