Pre_GI Gene

Some Help

Host: NC_012967 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012967:3729813 Escherichia coli B str. REL606 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
37288673729826960putative polysaccharide deacetylaseQuickGO ontologyBLASTP
372981337308471035putative glycosyl transferaseQuickGO ontologyBLASTP
373108637321111026L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
3732121373331711972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
37335313734463933ADP-L-glycero-D-mannoheptose-6-epimeraseQuickGO ontologyBLASTP
373447337355191047ADP-heptoseLPS heptosyltransferase IIQuickGO ontologyBLASTP
37355233736503981ADP-heptoseLPS heptosyl transferase IQuickGO ontologyBLASTP
373657337378261254Lipid A-core surface polymer ligaseQuickGO ontologyBLASTP
37378723738855984putative beta13-glucosyltransferaseQuickGO ontologyBLASTP
373894037399651026UDP-galactoseGalactosyl LPS alpha12-galactosyltransferaseQuickGO ontologyBLASTP
37399913740539549lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
37412133741716504IS1 protein InsBQuickGO ontologyBLASTP
37416353741910276IS1 protein InsAQuickGO ontologyBLASTP
374248137434971017UDP-glucoseGlucosyl LPS alpha13-glucosyltransferase WaaOQuickGO ontologyBLASTP
37435133744319807kinase that phosphorylates core heptose of lipopolysaccharideQuickGO ontologyBLASTP
374430337454271125glucosyltransferase IQuickGO ontologyBLASTP
374542437464821059lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
3746895374817212783-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
37481803748659480phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
37486983749507810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
3749605374977216850S ribosomal protein L33QuickGO ontologyBLASTP
3749793375002923750S ribosomal protein L28QuickGO ontologyBLASTP
37502463750914669DNA repair protein RadCQuickGO ontologyBLASTP
375108637523061221bifunctional phosphopantothenoylcysteine decarboxylasephosphopantothenate synthaseQuickGO ontologyBLASTP
37522873752742456deoxyuridine 5-triphosphate nucleotidohydrolaseQuickGO ontologyBLASTP
37528493753445597nucleoid occlusion proteinQuickGO ontologyBLASTP