Pre_GI Gene

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Host: NC_006576 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006576:1551939 Synechococcus elongatus PCC 6301, complete genome

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Freshwater organism. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15519391552892954ATP-binding protein of ABC transporterQuickGO ontologyBLASTP
15528971553706810ABC-2 type transport system permease proteinQuickGO ontologyBLASTP
155371115552251515hypothetical proteinBLASTP
15553421555896555translation initiation factor IF-3QuickGO ontologyBLASTP
15561771556617441hypothetical proteinBLASTP
15576411558414774glucose-1-phosphate cytidylyltransferaseQuickGO ontologyBLASTP
155841115595171107CDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
15600371560582546dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
156057915618111233putative C-3 methyl transferaseQuickGO ontologyBLASTP
156181515629421128perosamine synthetaseQuickGO ontologyBLASTP
15636931564460768hypothetical proteinBLASTP
156453115656791149hypothetical proteinBLASTP
15658531566371519hypothetical proteinBLASTP
156635815682771920SPY proteinQuickGO ontologyBLASTP
156826715708132547hypothetical proteinBLASTP
15708991571333435a part of pilin polypeptide PilAQuickGO ontologyBLASTP
15715221571956435a part of pilin polypeptide PilAQuickGO ontologyBLASTP
157200215743682367hypothetical proteinBLASTP
157437615757191344hypothetical proteinBLASTP
157595615773111356hypothetical proteinBLASTP
157740615793431938hypothetical proteinBLASTP
15793871579752366hypothetical proteinBLASTP
1579792158002823750S ribosomal protein L28QuickGO ontologyBLASTP
158013815815381401probable transport proteinQuickGO ontologyBLASTP
15818761582253378dihydroneopterin aldolaseQuickGO ontologyBLASTP
1582338158375314166-phosphogluconate dehydrogenaseQuickGO ontologyBLASTP