Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:4427000 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
442709744281221026L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
4428132442932811972-amino-3-ketobutyrate CoA ligaseQuickGO ontologyBLASTP
44296034430475873Involved in lipopolysaccharide biosynthesisQuickGO ontologyBLASTP
44307644431696933ADP-L-glycero-D-manno-heptose-6-epimeraseQuickGO ontologyBLASTP
443170644327521047lipopolysaccharide heptosyltransferase IIQuickGO ontologyBLASTP
44327564433748993lipopolysaccharide heptosyltransferase IQuickGO ontologyBLASTP
443374544349531209Lipid A-coresurface polymer ligase WaaLQuickGO ontologyBLASTP
443499044361321143lipopolysaccharide 12-N-acetylglucosaminetransferaseQuickGO ontologyBLASTP
443614144371541014lipopolysaccharide 12-glucosyltransferaseQuickGO ontologyBLASTP
44371794437886708lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
443791244389191008lipopolysaccharide 13-galactosyltransferaseQuickGO ontologyBLASTP
44389624439768807lipopolysaccharide core biosynthesis protein RfaPQuickGO ontologyBLASTP
443975244408761125lipopolysaccharide core biosynthesis protein RfaGQuickGO ontologyBLASTP
444087344419311059lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
444234444436211278Kdo transferase WaaAQuickGO ontologyBLASTP
44436294444108480phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
44441474444956810formamidopyrimidine-DNA glycosylase Fapy-DNA glycosylase DNA-apurinic or apyrimidinic site lyase mutMQuickGO ontologyBLASTP
4445054444522116850S ribosomal protein L33QuickGO ontologyBLASTP
4445242444547823750S ribosomal protein L28QuickGO ontologyBLASTP
44456954446369675DNA repair proteinQuickGO ontologyBLASTP
444653544477551221DfpQuickGO ontologyBLASTP
44477334448191459deoxyuridine 5-triphosphate nucleotidohydrolaseQuickGO ontologyBLASTP
44482984448894597HTH-type protein slmAQuickGO ontologyBLASTP
44489314449572642Orotate phosphoribosyltransferaseQuickGO ontologyBLASTP