Pre_GI Gene

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Host: NC_011205 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011205:3942500 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
394258139436061026L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
3943616394481211972-amino-3-ketobutyrate CoA ligaseQuickGO ontologyBLASTP
39450153945947933ADP-L-glycero-D-manno-heptose-6-epimeraseQuickGO ontologyBLASTP
394595039469961047ADP-heptoseLPS heptosyltransferase IIQuickGO ontologyBLASTP
39469963947949954ADP-heptoseLPS heptosyl transferase IQuickGO ontologyBLASTP
394798939492031215O-antigen ligaseQuickGO ontologyBLASTP
394926139504061146lipopolysaccharide 12-N-acetylglucosaminetransferaseQuickGO ontologyBLASTP
39514643952162699lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
395218539531981014lipopolysaccharide 12-glucosyltransferaseQuickGO ontologyBLASTP
395321639542291014lipopolysaccharide 13-galactosyltransferaseQuickGO ontologyBLASTP
395423539553141080UDP-D-galactoseglucosyllipopolysaccharide-1 6-D-galactosyltransferaseQuickGO ontologyBLASTP
39553843955593210hypothetical proteinBLASTP
39556493956446798lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
395643939575631125lipopolysaccharide core biosynthesis protein RfaGQuickGO ontologyBLASTP
395756039586301071lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
3959039396031612783-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
39603253960804480phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
39608323961641810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
3961739396190616850S ribosomal protein L33QuickGO ontologyBLASTP
3961927396216323750S ribosomal protein L28QuickGO ontologyBLASTP
39623813963046666DNA repair protein RadCQuickGO ontologyBLASTP
396321939644421224BLASTP
39644203964878459deoxyuridine 5-triphosphate nucleotidohydrolaseQuickGO ontologyBLASTP
39649863965582597nucleoid occlusion proteinQuickGO ontologyBLASTP
39656603966301642orotate phosphoribosyltransferaseQuickGO ontologyBLASTP
39663803967096717ribonuclease PHQuickGO ontologyBLASTP