Pre_GI: BLASTP Hits

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Query: NC_013222:2795919:2815260 Robiginitalea biformata HTCC2501, complete genome

Start: 2815260, End: 2815907, Length: 648

Host Lineage: Robiginitalea biformata; Robiginitalea; Flavobacteriaceae; Flavobacteriales; Bacteroidetes; Bacteria

General Information: Robiginitalea biformata was isolated from seawater taken at a depth of 10 meters from the Sargasso Sea (Atlantic Ocean). Although a member of the Flavobacteriaceae, the DNA G+C content of this organism is much higher than for other members of this family.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015167:313506:335892335892336584693Cellulophaga lytica DSM 7489 chromosome, complete genomeLytTR family two component transcriptional regulator2e-116417
NC_014934:11341:366453664537337693Cellulophaga algicola DSM 14237 chromosome, complete genometwo component transcriptional regulator, lyttr family9e-115412
NC_016940:470163:502234502234502953720Saprospira grandis str. Lewin chromosome, complete genometwo component transcriptional regulator, LytTR family protein1e-36152
NC_013037:5442131:545847354584735459195723Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LytTR family1e-35149
NC_015703:2693463:270975827097582710495738Runella slithyformis DSM 19594 chromosome, complete genomeLytTR family two component transcriptional regulator2e-32139
NC_018721:2872780:287278028727802873505726Psychroflexus torquis ATCC 700755 chromosome, complete genometwo-component system response regulator, LytR/AlgR family4e-32137
NC_009615:2311352:231296223129622313666705Parabacteroides distasonis ATCC 8503 chromosome, complete genometwo-component system response regulator1e-31136
NC_015510:1234500:125508212550821255795714Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator5e-31134
NC_015311:403281:438961438961439716756Prevotella denticola F0289 chromosome, complete genomeLytTr DNA-binding domain-containing protein4e-30131
NC_019968:1084288:112808911280891128805717Prevotella dentalis DSM 3688 chromosome 2, complete sequenceresponse regulator of the LytR/AlgR family3e-30131
NC_019968:1304450:131481713148171315533717Prevotella dentalis DSM 3688 chromosome 2, complete sequenceresponse regulator of the LytR/AlgR family3e-30131
NC_015703:4483500:449416244941624494887726Runella slithyformis DSM 19594 chromosome, complete genomeLytTR family two component transcriptional regulator1e-29129
NC_004663:1499145:151426015142601514958699Bacteroides thetaiotaomicron VPI-5482, complete genometwo-component system response regulator2e-29128
NC_016776:2237404:224442922444292245127699Bacteroides fragilis 638R, complete genomeputative two-component system response regulator9e-29126
NC_003228:2245181:225199322519932252691699Bacteroides fragilis NCTC 9343, complete genomeputative two-component system response regulator9e-29126
NC_006347:2190000:219573921957392196437699Bacteroides fragilis YCH46, complete genometwo-component system response regulator9e-29126
NC_014933:3715467:371826637182663718967702Bacteroides helcogenes P 36-108 chromosome, complete genometwo component transcriptional regulator, LytTR family2e-28125
NC_006347:3843228:384459438445943845331738Bacteroides fragilis YCH46, complete genometwo-component system response regulator1e-28125
NC_016776:3798108:379737437973743798111738Bacteroides fragilis 638R, complete genomeputative two-component system, response regulator1e-28125
NC_003228:3752035:375130137513013752038738Bacteroides fragilis NCTC 9343, complete genomeputative two-component system, response regulator1e-28125
NC_015510:1234500:125002412500241250725702Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator5e-27120
NC_020126:7686076:768779776877977688558762Myxococcus stipitatus DSM 14675, complete genomeDNA-binding response regulator6e-27120
NC_013730:1074393:108006810800681080817750Spirosoma linguale DSM 74, complete genometwo component transcriptional regulator, LytTR family5e-26117
NC_015703:4483500:449270544927054493430726Runella slithyformis DSM 19594 chromosome, complete genomeLytTR family two component transcriptional regulator5e-25114
NC_014032:338547:361332361332362084753Salinibacter ruber M8 chromosome, complete genomesensory transduction protein lytT1e-24112
NC_013037:6209424:621057962105796211313735Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LytTR family2e-24112
NC_018868:2867500:286792228679222868728807Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeresponse regulator3e-22105
NC_018704:2417902:242905824290582429768711Amphibacillus xylanus NBRC 15112, complete genomeputative two-component system response regulator5e-22104
NC_020126:8984500:898947889894788990179702Myxococcus stipitatus DSM 14675, complete genometwo component transcriptional regulator, LytTR family protein1e-21103
NC_013731:11605:284162841629144729Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequencetwo component transcriptional regulator, LytTR family2e-21102
NC_013730:2558999:258794825879482588718771Spirosoma linguale DSM 74, complete genometwo component transcriptional regulator, LytTR family7e-21100
NC_007333:3360000:336380033638003364594795Thermobifida fusca YX, complete genomeresponse regulator receiver4e-2097.8
NC_013316:2033906:207459320745932075183591Clostridium difficile R20291, complete genomehypothetical protein5e-2097.8
NC_007677:324000:344731344731345489759Salinibacter ruber DSM 13855, complete genomealginate biosynthesis regulatory protein8e-2097.1
NC_020126:7285452:730537573053757306187813Myxococcus stipitatus DSM 14675, complete genomeLyTR family two component transcriptional regulator5e-1994.4
NC_013061:1856969:187473818747381875517780Pedobacter heparinus DSM 2366, complete genomeLytTr DNA-binding region1e-1893.6
NC_016751:1700164:172001917200191720765747Marinitoga piezophila KA3 chromosome, complete genomeresponse regulator of the LytR/AlgR family8e-1993.6
NC_009616:99647:116610116610117290681Thermosipho melanesiensis BI429 chromosome, complete genomeLytTR family two component transcriptional regulator1e-1893.2
NC_014633:583858:604072604072604797726Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceLytTR family two component transcriptional regulator2e-1892.4
NC_020054:3501467:351843235184323519181750Fibrella aestuarina BUZ 2 drat genometwo component transcriptional regulator, LytTR family7e-1787.4
NC_020260:1111130:112837811283781129103726Cronobacter sakazakii Sp291, complete genometwo-component response-regulatory protein YehT1e-1686.3
NC_008536:1778500:179196917919691792745777Solibacter usitatus Ellin6076, complete genomeresponse regulator receiver protein2e-1686.3
NC_009778:1070000:108629010862901087015726Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1686.3
NC_016609:4331359:434517843451784345930753Niastella koreensis GR20-10 chromosome, complete genomeLytTR family two component transcriptional regulator3e-1685.5
NC_017316:2581781:259771425977142598442729Enterococcus faecalis OG1RF chromosome, complete genomeresponse regulator3e-1685.1
NC_016609:2951301:298003529800352980781747Niastella koreensis GR20-10 chromosome, complete genomeLytTR family two component transcriptional regulator3e-1685.1
NC_004668:3053119:306801830680183068746729Enterococcus faecalis V583, complete genomeresponse regulator4e-1684.7
NC_009792:642881:644563644563645282720Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-1684.3
NC_009922:42696:456394563946355717Alkaliphilus oremlandii OhILAs, complete genometwo component transcriptional regulator, LytTR family8e-1683.6
NC_012917:3565268:357072135707213571437717Pectobacterium carotovorum subsp. carotovorum PC1, complete genometwo component transcriptional regulator, LytTR family1e-1583.6
NC_020126:5152359:516493051649305165715786Myxococcus stipitatus DSM 14675, complete genomeDNA-binding response regulator3e-1582
NC_013008:2889743:288902728890272889746720Escherichia coli O157:H7 str. TW14359 chromosome, complete genometwo-component response-regulatory protein YehT3e-1581.6
NC_002695:2893951:289323528932352893954720Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-1581.6
NC_011750:919953:938353938353939072720Escherichia coli IAI39 chromosome, complete genomeputative two-component response-regulatory protein YehT5e-1581.3
NC_014152:2849991:286797228679722868697726Thermincola sp. JR, complete genometwo component transcriptional regulator, LytTR family7e-1580.9
NC_009089:1283000:128229312822931283006714Clostridium difficile 630, complete genometwo-component response regulator6e-1580.9
NC_015510:6653159:666073866607386661478741Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator8e-1580.5
NC_010658:2529033:255507825550782555812735Shigella boydii CDC 3083-94, complete genomeresponse regulator2e-1479
NC_008258:2473000:249696424969642497698735Shigella flexneri 5 str. 8401, complete genomeputative 2-component transcriptional regulator2e-1479
NC_004337:2478461:250322425032242503958735Shigella flexneri 2a str. 301, complete genomeputative 2-component transcriptional regulator2e-1479
CP002516:1419413:142028314202831421017735Escherichia coli KO11, complete genometwo component transcriptional regulator, LytTR family2e-1479
NC_013941:2928000:296958729695872970321735Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-1479
NC_016822:2678691:270562327056232706357735Shigella sonnei 53G, complete genomeLytTR family two component transcriptional regulator2e-1479
NC_016902:1419413:142028314202831421017735Escherichia coli KO11FL chromosome, complete genomeLytTR family two component transcriptional regulator2e-1479
NC_013194:1040197:105397910539791054695717Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetwo component transcriptional regulator, LytTR family2e-1479
NC_012880:1091486:109317110931711093896726Dickeya dadantii Ech703, complete genometwo component transcriptional regulator, LytTR family3e-1478.6
NC_015726:3452232:345363334536333454394762Cupriavidus necator N-1 chromosome 1, complete sequenceLytR family transcriptional regulator5e-1477.8
NC_008009:1264791:126479112647911265579789Acidobacteria bacterium Ellin345, complete genometranscriptional regulator, LytR/AlgR family9e-1477
NC_009828:600349:601856601856602527672Thermotoga lettingae TMO, complete genometwo component transcriptional regulator, LytTR family1e-1376.3
NC_017025:1735835:174216717421671742898732Flavobacterium indicum GPTSA100-9, complete genomeTwo-component system response regulatory protein, LytTR family3e-1375.1
NC_019902:498500:511540511540512247708Thioalkalivibrio nitratireducens DSM 14787, complete genomeresponse regulator receiver protein1e-1273.6
NC_013730:2490000:250045225004522501119668Spirosoma linguale DSM 74, complete genome1e-1272.8
NC_011830:3904034:392032539203253921080756Desulfitobacterium hafniense DCB-2, complete genometwo component transcriptional regulator, LytTR family2e-1272.4
NC_012778:207415:217309217309218022714Eubacterium eligens ATCC 27750, complete genometwo-component system, LytT family, response regulator2e-1272.4
NC_014363:1973670:198281319828131983520708Olsenella uli DSM 7084 chromosome, complete genometwo component transcriptional regulator, LytTR family2e-1272.4
NC_015177:2972701:297270129727012973447747Pedobacter saltans DSM 12145 chromosome, complete genometwo component transcriptional regulator, LytTR family3e-1272
NC_014376:2921769:293831329383132939053741Clostridium saccharolyticum WM1 chromosome, complete genometwo component transcriptional regulator, LytTR family5e-1271.2
NC_014219:999648:99964899964810007811134Bacillus selenitireducens MLS10 chromosome, complete genomeresponse regulator receiver and SARP domain protein8e-1270.5
NC_016048:308342:328892328892329599708Oscillibacter valericigenes Sjm18-20, complete genomeputative two-component response regulator1e-1169.7
NC_016609:5890292:591878759187875919545759Niastella koreensis GR20-10 chromosome, complete genomeLytTR family two component transcriptional regulator1e-1169.7
NC_013174:501326:500595500595501329735Jonesia denitrificans DSM 20603, complete genometwo component transcriptional regulator, LytTR family2e-1168.9
NC_012563:3729817:376253737625373763301765Clostridium botulinum A2 str. Kyoto, complete genomeDNA-binding response regulator, LytTr family3e-1168.6
NC_009699:3581376:361409836140983614862765Clostridium botulinum F str. Langeland chromosome, complete genomeLytTr family DNA-binding response regulator3e-1168.6
NC_017297:3594000:361271236127123613476765Clostridium botulinum F str. 230613 chromosome, complete genomeDNA-binding response regulator, LytTr family3e-1168.6
NC_010520:3580000:359767035976703598434765Clostridium botulinum A3 str. Loch Maree, complete genomeDNA-binding response regulator, LytTr family6e-1167.8
NC_010520:1146000:116684911668491167565717Clostridium botulinum A3 str. Loch Maree, complete genomeLytTr DNA-binding domain family1e-1066.6
NC_009617:648000:666775666775667533759Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeLytTR family two component transcriptional regulator2e-1066.2
NC_015589:3852217:386341738634173864118702Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeresponse regulator receiver3e-1065.5
NC_011898:3159411:319241031924103193168759Clostridium cellulolyticum H10, complete genometwo component transcriptional regulator, LytTR family3e-1065.1
NC_008261:576923:593925593925594641717Clostridium perfringens ATCC 13124, complete genomeDNA-binding response regulator5e-1064.7
NC_014624:3316916:332634833263483326935588Eubacterium limosum KIST612 chromosome, complete genomeLytTR family two component transcriptional regulator4e-1064.7
NC_009495:3502000:352046735204673521231765Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding response regulator, LytTr family4e-1064.7
NC_009697:3463736:349645534964553497219765Clostridium botulinum A str. ATCC 19397 chromosome, completeLytTr family DNA-binding response regulator4e-1064.7
NC_016627:1485799:149181114918111492536726Clostridium clariflavum DSM 19732 chromosome, complete genomeresponse regulator of the LytR/AlgR family6e-1064.3
NC_007644:1638083:165823516582351658972738Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, LytR/AlgR family6e-1064.3
NC_016048:375676:399488399488400183696Oscillibacter valericigenes Sjm18-20, complete genomeputative two-component response regulator9e-1063.5
NC_007907:2879568:289297128929712893726756Desulfitobacterium hafniense Y51, complete genomehypothetical protein9e-1063.5
NC_007907:2249607:225088322508832251608726Desulfitobacterium hafniense Y51, complete genomehypothetical protein9e-1063.5
NC_014393:1421122:1427612142761214287121101Clostridium cellulovorans 743B chromosome, complete genomeresponse regulator receiver and SARP domain-containing protein1e-0963.5
NC_016894:77853:840308403084764735Acetobacterium woodii DSM 1030 chromosome, complete genometwo component transcriptional regulator1e-0963.2
NC_015589:2281054:228878522887852289513729Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeLytTr DNA-binding protein1e-0963.2
NC_017295:1809386:181342318134231814184762Clostridium acetobutylicum EA 2018 chromosome, complete genomeResponse regulator (CheY-like receiver domain and DNA-binding HTH domain)3e-0961.6
NC_003030:1811820:181401018140101814771762Clostridium acetobutylicum ATCC 824, complete genomeResponse regulator (CheY-like receiver domain and DNA-binding HTH domain)3e-0961.6
NC_015687:1811573:181561018156101816371762Clostridium acetobutylicum DSM 1731 chromosome, complete genomeresponse regulator3e-0961.6
NC_015690:8614000:862677486267748627514741Paenibacillus mucilaginosus KNP414 chromosome, complete genometwo-component response regulator4e-0961.2
NC_020272:3187482:3201383320138332024591077Bacillus amyloliquefaciens IT-45, complete genomeresponse regulator MprA5e-0961.2
NC_014387:281157:282005282005282703699Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeLytTR/response regulator domain-containing protein5e-0961.2
NC_007575:973559:975967975967976665699Sulfurimonas denitrificans DSM 1251, complete genomeLytR/AlgR family transcriptional regulator6e-0960.8
NC_014633:837588:857228857228857983756Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceLytTR family two component transcriptional regulator7e-0960.5
NC_015977:3424178:347917734791773479884708Roseburia hominis A2-183 chromosome, complete genomeresponse regulator of the lytr/algr family protein1e-0859.7
NC_014624:287500:304428304428305174747Eubacterium limosum KIST612 chromosome, complete genomeResponse regulator of the LytR/AlgR family2e-0858.9
NC_015856:3536441:356048135604813561233753Collimonas fungivorans Ter331 chromosome, complete genomeputative two-component response regulator transcription protein3e-0858.9
NC_021182:1473535:147521614752161475986771Clostridium pasteurianum BC1, complete genomeresponse regulator of the LytR/AlgR family4e-0858.2
NC_014616:54500:567695676957485717Bifidobacterium bifidum S17 chromosome, complete genometwo-component response regulator4e-0858.2
NC_014219:999648:1007214100721410083561143Bacillus selenitireducens MLS10 chromosome, complete genomeresponse regulator receiver and SARP domain protein5e-0857.8
NC_006510:1501487:152070415207041521444741Geobacillus kaustophilus HTA426, complete genometranscriptional regulator8e-0857.4
NC_014206:1694330:172848917284891729271783Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator1e-0757
NC_018515:1406816:141371214137121414566855Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeresponse regulator containing CheY-like receiver and SARP domains1e-0756.6
NC_015680:1315040:1350641135064113517501110Pyrococcus yayanosii CH1 chromosome, complete genomechemotaxis-specific methylesterase1e-0756.6
NC_020291:1045058:1049931104993110514631533Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometwo component transcriptional regulator, AraC family1e-0756.2
NC_014828:943911:9567489567489578541107Ethanoligenens harbinense YUAN-3 chromosome, complete genomeresponse regulator receiver and SARP domain protein2e-0756.2
NC_016935:2347691:2391951239195123934981548Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein3e-0755.5
NC_015690:1818333:1862088186208818636261539Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYesN53e-0755.5
NC_018868:2615822:263686726368672637601735Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomealginate biosynthesis regulatory protein AlgR3e-0755.5
NC_014376:317312:329490329490329867378Clostridium saccharolyticum WM1 chromosome, complete genomeresponse regulator receiver and SARP domain protein4e-0755.1
NC_016935:1365463:1428425142842514300291605Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein4e-0754.7
NC_015690:3941113:4009017400901740106211605Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYesN134e-0754.7
NC_013406:1217385:1220860122086012224821623Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator5e-0754.3
NC_013223:1090397:1107118110711811085031386Desulfohalobium retbaense DSM 5692, complete genomeputative two component, sigma54 specific, transcriptional regulator, Fis family7e-0753.9
NC_016818:1963875:1984298198429819853471050Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completechemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain9e-0753.5
NC_008261:1249595:1267397126739712689171521Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, AraC family1e-0653.1
NC_014562:1772842:1798973179897318000221050Pantoea vagans C9-1 chromosome, complete genomeChemotaxis response regulator, CheB type2e-0652.8
NC_011979:4293859:1404914049155991551Geobacter sp. FRC-32, complete genomemulti-sensor signal transduction histidine kinase2e-0652.8
NC_014206:1694330:1703164170316417043721209Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator2e-0652.4
NC_014328:522045:543360543360544055696Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional regulator2e-0652.4
NC_020541:3655223:367719736771973678060864Rhodanobacter sp. 2APBS1, complete genomeresponse regulator of the LytR/AlgR family2e-0652.4
NC_012225:569590:5841785841785853111134Brachyspira hyodysenteriae WA1, complete genomeresponse regulator receiver modulated CheB methylesterase3e-0652
NC_017243:1698000:1712374171237417135071134Brachyspira intermedia PWS/A chromosome, complete genomeresponse regulator receiver modulated CheB methylesterase3e-0652
NC_014828:2497462:2507911250791125089751065Ethanoligenens harbinense YUAN-3 chromosome, complete genometwo component transcriptional regulator, AraC family3e-0652
NC_014652:163347:184206184206184964759Caldicellulosiruptor hydrothermalis 108 chromosome, completetwo component transcriptional regulator, arac family3e-0652
NC_017096:779550:7851687851687865801413Caldisericum exile AZM16c01, complete genomeNtrC family two-component system response regulator3e-0652
NC_010718:2460893:2465397246539724665751179Natranaerobius thermophilus JW/NM-WN-LF, complete genomeresponse regulator receiver protein4e-0651.6
NC_015172:850802:866232866232866960729Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometwo component transcriptional regulator, LytTR family5e-0651.2
NC_013406:347995:347995347995348765771Paenibacillus sp. Y412MC10 chromosome, complete genomeresponse regulator receiver and SARP domain-containing protein6e-0651.2