Pre_GI Gene

Some Help

Host: NC_006347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006347:2190000 Bacteroides fragilis YCH46, complete genome

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. This strain was isolated from a patient with septicemia in Japan. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21900692190863795hypothetical proteinBLASTP
219097721922601284SOS mutagenesis and repair protein UmuC homologQuickGO ontologyBLASTP
21922602192703444error-prone repair SOS-response transcriptional repressor UmuD homologQuickGO ontologyBLASTP
219308721943161230hypothetical proteinBLASTP
21943272194749423hypothetical proteinBLASTP
21948122194964153hypothetical protein
21950702195330261hypothetical proteinBLASTP
21957392196437699two-component system response regulatorQuickGO ontologyBLASTP
219644021974921053putative two-component system sensor protein without kinase domainQuickGO ontologyBLASTP
219762521988451221ABC transporter permease proteinQuickGO ontologyBLASTP
21988592199602744putative ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
219960522008281224periplasmic component of efflux systemQuickGO ontologyBLASTP
220086522022681404outer membrane efflux proteinQuickGO ontologyBLASTP
22027192202934216hypothetical proteinBLASTP
220296722045201554cytochrome D ubiquinol oxidase subunit IQuickGO ontologyBLASTP
220454622056941149cytochrome D ubiquinol oxidase subunit IIQuickGO ontologyBLASTP
220581822068821065hypothetical proteinBLASTP
220688722078971011putative periplasmic proteinQuickGO ontologyBLASTP
22078842208735852putative membrane-associated metal-dependent hydrolaseQuickGO ontologyBLASTP
220873222100121281coproporphyrinogen III oxidaseQuickGO ontologyBLASTP
220999922115371539hypothetical proteinBLASTP
22115402212496957glycerate dehydrogenaseQuickGO ontologyBLASTP