Pre_GI Gene

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Host: NC_013061 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013061:1856969 Pedobacter heparinus DSM 2366, complete genome

Host Lineage: Pedobacter heparinus; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Isolation: Soil; Temp: Mesophile; Temp: 25 - 30C; Habitat: Soil. Formerly Sphingobacterium heparinum this organism was isolated from soil. This organism is able to degrade heparin and heparan sulfate glycosaminoglycans, which are components of extracellular polysaccharides and the cell surface.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
185696918604363468TonB-dependent receptor plugQuickGO ontologyBLASTP
186043618620611626hypothetical proteinBLASTP
18622051863026822Phytanoyl-CoA dioxygenaseQuickGO ontologyBLASTP
18630201863862843Xylose isomerase domain protein TIM barrelQuickGO ontologyBLASTP
186387918667432865glycoside hydrolase family 2 sugar bindingQuickGO ontologyBLASTP
186675518682331479glycoside hydrolase family 28QuickGO ontologyBLASTP
18682361868976741EndopygalactorunaseQuickGO ontologyBLASTP
186898318704521470glycoside hydrolase family 28QuickGO ontologyBLASTP
187046218723151854peptidase S15QuickGO ontologyBLASTP
187230518735791275peptidase M28QuickGO ontologyBLASTP
18738341874748915histidine kinase internal regionQuickGO ontologyBLASTP
18747381875517780LytTr DNA-binding regionQuickGO ontologyBLASTP