Pre_GI: BLASTP Hits

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Query: NC_012483:3731542:3774225 Acidobacterium capsulatum ATCC 51196, complete genome

Start: 3774225, End: 3774599, Length: 375

Host Lineage: Acidobacterium capsulatum; Acidobacterium; Acidobacteriaceae; Acidobacteriales; Acidobacteria; Bacteria

General Information: Isolated from acidic mine drainage in Yanahara mine, Okayama, Japan. Acidophilic bacterium. This genus comprises a number of species commonly found in water reservoirs, microbial mats, many different soil types, marine and freshwater sediments, as well as in hot-spring mats and sediments, etc. Furthermore, they sometimes form the dominant group in a habitat. These bacteria are involved in the first step of destruction of biologically complex molecules produced by autotrophic (capable of synthesizing their own nutrients) microorganisms. Acidobacterium capsulatum is an aerobic, mesophilic, chemo-organotroph able to use a variety of carbon sources and to grow up to pH 6.0. The species comprises several strains characterized by orange pigmentation, production of menoquinones as their sole quinones, and branched-chain iso fatty acids as their cell envelope components.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015682:205900:243613243613244059447Thermodesulfobacterium sp. OPB45 chromosome, complete genomesingle-strand binding protein2e-0960.8
NC_012967:3769499:378437137843713784856486Escherichia coli B str. REL606 chromosome, complete genomeSingle-strand binding protein (SSB) (Helix-destabilizing protein)3e-0960.5
NC_012947:44512:595815958160066486Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completesingle-strand binding protein3e-0960.5
NC_010102:4396500:440224244022424402772531Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0960.5
NC_003198:4315807:432141043214104321940531Salmonella enterica subsp. enterica serovar Typhi str. CT18,single-strand DNA-binding protein4e-0960.1
NC_004631:4300457:430606043060604306590531Salmonella enterica subsp. enterica serovar Typhi Ty2, completesingle-strand DNA-binding protein4e-0960.1
NC_011083:4466634:447223744722374472767531Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,single-stranded DNA-binding protein4e-0960.1
NC_006511:4225455:423105842310584231588531Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCsingle-strand DNA-binding protein4e-0960.1
NC_011149:4390315:439591843959184396448531Salmonella enterica subsp. enterica serovar Agona str. SL483,single-stranded DNA-binding protein4e-0960.1
NC_003197:4470683:447628644762864476816531Salmonella typhimurium LT2, complete genomesingle-strand DNA-binding protein4e-0960.1
NC_011080:4461851:446745444674544467984531Salmonella enterica subsp. enterica serovar Newport str. SL254,single-stranded DNA-binding protein4e-0960.1
NC_017046:4490500:449611644961164496769654Salmonella enterica subsp. enterica serovar Typhimurium str. 798single-strand DNA-binding protein4e-0960.1
NC_012125:4400636:440611644061164406769654Salmonella enterica subsp. enterica serovar Paratyphi C strainsingle-stranded DNA-binding protein4e-0960.1
NC_010067:3310336:335206733520673352720654Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-0960.1
NC_021066:3769405:378679237867923787319528Raoultella ornithinolytica B6, complete genomessDNA-binding protein4e-0960.1
NC_006905:4405301:441090444109044411434531Salmonella enterica subsp. enterica serovar Choleraesuis strsingle-strand DNA-binding protein4e-0960.1
NC_011094:4361238:436684143668414367371531Salmonella enterica subsp. enterica serovar Schwarzengrund strsingle-stranded DNA-binding protein4e-0960.1
NC_011147:4221000:422674542267454227275531Salmonella enterica subsp. enterica serovar Paratyphi A strsingle-stranded DNA-binding protein4e-0960.1
NC_016863:4431831:443743444374344437964531Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1single-stranded DNA-binding protein4e-0960.1
NC_016860:4575772:458137545813754581905531Salmonella enterica subsp. enterica serovar Typhimurium strsingle-stranded DNA-binding protein4e-0960.1
NC_016857:4491976:449757944975794498109531Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74single-strand DNA-binding protein4e-0960.1
NC_016856:4482845:448982844898284490358531Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssingle-strand DNA-binding protein4e-0960.1
NC_016832:4288980:429458342945834295113531Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Single-stranded DNA-binding protein4e-0960.1
NC_016831:4286000:429176542917654292295531Salmonella enterica subsp. enterica serovar Gallinarum/pullorumsingle-strand DNA-binding protein4e-0960.1
NC_016810:4491975:449757844975784498108531Salmonella enterica subsp. enterica serovar Typhimurium strsingle-strand DNA-binding protein4e-0960.1
NC_013892:1483000:150161415016141502123510Xenorhabdus bovienii SS-2004 chromosome, complete genomesingle-stranded DNA-binding protein4e-0960.1
NC_011294:4327904:433350743335074334037531Salmonella enterica subsp. enterica serovar Enteritidis strsingle-stranded DNA-binding protein4e-0960.1
NC_011274:4305812:431141543114154311945531Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91single-stranded DNA-binding protein4e-0960.1
NC_011205:4486142:449174544917454492275531Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853single-stranded DNA-binding protein4e-0960.1
NC_009337:320389:338254338254338760507Chlorobium phaeovibrioides DSM 265 chromosome, complete genomesingle-strand binding protein6e-0959.3
NC_015761:4098481:410408341040834104613531Salmonella bongori NCTC 12419, complete genomesingle-strand DNA-binding protein6e-0959.3
NC_020181:3585898:361295336129533613477525Enterobacter aerogenes EA1509E, complete genomeSingle-stranded DNA-binding protein9e-0958.9
NC_007613:4119771:413106441310644131600537Shigella boydii Sb227, complete genomessDNA-binding protein1e-0858.5
NC_011026:1284966:128874712887471289271525Chloroherpeton thalassium ATCC 35110, complete genomesingle-strand binding protein1e-0858.5
NC_010658:4257310:427249742724974273012516Shigella boydii CDC 3083-94, complete genomesingle-stranded DNA-binding protein1e-0858.5
NC_014228:3505320:352259335225933523105513Xenorhabdus nematophila ATCC 19061, complete genomessDNA-binding protein controls activity of RecBCD nuclease2e-0857.8
NC_014228:3391500:341802234180223418534513Xenorhabdus nematophila ATCC 19061, complete genomesingle-strand binding protein2e-0857.8
NC_004757:2657490:267719526771952677644450Nitrosomonas europaea ATCC 19718, complete genomeSingle-strand binding protein family2e-0857.4
NC_002128:35000:471304713047582453Escherichia coli O157:H7 str. Sakai plasmid pO157, completesingle-strand binding protein3e-0857.4
NC_007414:56508:696666966670157492Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencesingle-stranded DNA-binding protein3e-0857
NC_010645:73573:780457804578545501Bordetella avium 197N, complete genomesingle-strand binding protein4e-0857
NC_018012:1628364:163214916321491632661513Thiocystis violascens DSM 198 chromosome, complete genomesingle stranded DNA-binding protein4e-0857
NC_013892:3278647:329515132951513295663513Xenorhabdus bovienii SS-2004 chromosome, complete genomessDNA-binding protein controls activity of RecBCD nuclease5e-0856.6
NC_003919:3396136:341143234114323411974543Xanthomonas axonopodis pv. citri str. 306, complete genomesingle-strand DNA-binding protein6e-0856.2
NC_011060:2637893:264286226428622643338477Pelodictyon phaeoclathratiforme BU-1, complete genomesingle-strand binding protein9e-0855.8
NC_014541:3927500:392978639297863930481696Ferrimonas balearica DSM 9799 chromosome, complete genomesingle-strand binding protein8e-0855.8
NC_009665:639914:641391641391642095705Shewanella baltica OS185 chromosome, complete genomessDNA-binding protein8e-0855.8
NC_015947:1142206:114816011481601148720561Burkholderia sp. JV3 chromosome, complete genomesingle-strand binding protein8e-0855.8
NC_011663:674069:675546675546676256711Shewanella baltica OS223 chromosome, complete genomessDNA-binding protein8e-0855.8
NC_011071:1178423:118191411819141182489576Stenotrophomonas maltophilia R551-3, complete genomesingle-strand binding protein8e-0855.8
NC_014972:2328228:235455523545552354980426Desulfobulbus propionicus DSM 2032 chromosome, complete genomesingle-strand-binding protein1e-0755.5
NC_008149:3790897:381031138103113810859549Yersinia pestis Nepal516, complete genomesingle-strand binding protein1e-0755.5
NC_010159:741819:759767759767760315549Yersinia pestis Angola, complete genomesingle-strand binding protein1e-0755.5
NC_005810:515744:515744515744516292549Yersinia pestis biovar Microtus str. 91001, complete genomesingle-strand DNA-binding protein1e-0755.5
NC_010465:4222586:423927542392754239823549Yersinia pseudotuberculosis YPIII, complete genomesingle-strand binding protein1e-0755.5
NC_006155:456000:456318456318456866549Yersinia pseudotuberculosis IP 32953, complete genomesingle-strand DNA-binding protein1e-0755.5
NC_009381:4169353:418877941887794189327549Yersinia pestis Pestoides F chromosome, complete genomesingle-stranded DNA-binding protein1e-0755.5
NC_009708:4215500:423536042353604235908549Yersinia pseudotuberculosis IP 31758 chromosome, complete genomesingle-stranded DNA-binding protein1e-0755.5
NC_017168:751078:770528770528771076549Yersinia pestis A1122 chromosome, complete genomesingle-stranded DNA-binding protein1e-0755.5
NC_017265:644384:661664661664662212549Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,ssDNA-binding protein1e-0755.5
NC_009832:358291:367777367777368283507Serratia proteamaculans 568, complete genomesingle-strand binding protein1e-0755.5
NC_012912:777592:790998790998791546549Dickeya zeae Ech1591, complete genomesingle-strand binding protein1e-0755.5
NC_017515:800000:817415817415817939525Neisseria meningitidis M04-240196 chromosome, complete genomesingle-strand binding protein1e-0755.1
NC_014752:834616:841780841780842304525Neisseria lactamica ST-640, complete genomesingle-stranded binding protein1e-0755.1
NC_017033:1052000:105671510567151057194480Frateuria aurantia DSM 6220 chromosome, complete genomesingle stranded DNA-binding protein1e-0755.1
NC_015458:2998000:301060530106053011093489Pusillimonas sp. T7-7 chromosome, complete genomesingle-strand binding protein2e-0754.7
NC_008786:4102606:412104441210444121547504Verminephrobacter eiseniae EF01-2, complete genomesingle-strand binding protein2e-0754.3
NC_014640:6815264:684192068419206842441522Achromobacter xylosoxidans A8 chromosome, complete genomesingle-stranded DNA-binding protein 13e-0753.9
NC_010170:3944228:397993239799323980411480Bordetella petrii, complete genomesingle-strand binding protein4e-0753.5
NC_013851:3142182:314798431479843148499516Allochromatium vinosum DSM 180 chromosome, complete genomesingle-strand binding protein4e-0753.5
NC_020829:636773:641229641229641726498Pseudomonas denitrificans ATCC 13867, complete genomesingle-stranded DNA-binding protein6e-0752.8
NC_010087:265625:285872285872286426555Burkholderia multivorans ATCC 17616 chromosome 3, completesingle-strand binding protein9e-0752.4
NC_010801:629347:638431638431638985555Burkholderia multivorans ATCC 17616 chromosome 3, completesingle-strand DNA-binding protein9e-0752.4
NC_005773:5149768:517168551716855172248564Pseudomonas syringae pv. phaseolicola 1448A, complete genomesingle-strand binding protein9e-0752.4
NC_014934:219000:219035219035219367333Cellulophaga algicola DSM 14237 chromosome, complete genomesingle-strand binding protein8e-0752.4
NC_014972:137184:142624142624143016393Desulfobulbus propionicus DSM 2032 chromosome, complete genomesingle-strand-binding protein1e-0652
NC_015138:5342473:534545053454505346016567Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completesingle-strand-binding protein1e-0651.6
NC_002971:211331:242391242391242867477Coxiella burnetii RSA 493, complete genomesingle-strand binding protein2e-0651.6
NC_007434:788500:792916792916793473558Burkholderia pseudomallei 1710b chromosome I, complete sequencesingle-strand DNA-binding protein3e-0650.8
NC_006350:595893:601561601561602115555Burkholderia pseudomallei K96243 chromosome 1, complete sequencesingle-strand DNA-binding protein3e-0650.8
NC_015556:717993:739169739169739663495Pseudomonas fulva 12-X chromosome, complete genomesingle-strand binding protein3e-0650.8
NC_010322:583842:588747588747589292546Pseudomonas putida GB-1 chromosome, complete genomesingle-stranded DNA-binding protein2e-0650.8
NC_007614:2517226:252841025284102528868459Nitrosospira multiformis ATCC 25196 chromosome 1, completesingle-strand binding protein6e-0649.7
NC_014366:478000:483368483368483904537Gamma proteobacterium HdN1, complete genomesingle-stranded DNA binding protein6e-0649.7