Pre_GI Gene

Some Help

Host: NC_011147 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011147:4221000 Salmonella enterica subsp. enterica serovar Paratyphi A str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
42211424221855714acid phosphatasephosphotransferaseQuickGO ontologyBLASTP
42219844222400417hypothetical proteinBLASTP
42224034222759357hypothetical proteinBLASTP
42227604223098339hypothetical proteinBLASTP
42230854223528444lipoproteinQuickGO ontologyBLASTP
422367242264972826excinuclease ABC subunit AQuickGO ontologyBLASTP
42267454227275531single-stranded DNA-binding proteinQuickGO ontologyBLASTP
42284644229096633hypothetical proteinBLASTP
422909342304811389integral membrane proteinQuickGO ontologyBLASTP
423047142317901320type-I secretion proteinQuickGO ontologyBLASTP
423178742330641278type-I secretion proteinQuickGO ontologyBLASTP
4233081424676313683inner membrane proteinQuickGO ontologyBLASTP
424680342488692067type-1 secretion proteinQuickGO ontologyBLASTP