Pre_GI Gene

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Host: NC_006155 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006155:456000 Yersinia pseudotuberculosis IP 32953, complete genome

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
456318456866549single-strand DNA-binding proteinQuickGO ontologyBLASTP
457114457428315hypothetical proteinBLASTP
4574424585901149probable alcohol dehydrogenaseQuickGO ontologyBLASTP
458657459481825rhamnulose-1-phosphate aldolaseQuickGO ontologyBLASTP
4594944607501257L-rhamnose isomeraseQuickGO ontologyBLASTP
4607474622041458rhamnulokinaseQuickGO ontologyBLASTP
462601463422822L-rhamnose operon regulatory proteinQuickGO ontologyBLASTP
463555464427873L-rhamnose operon transcriptional activatorQuickGO ontologyBLASTP
4645764656101035L-rhamnose-proton symporterQuickGO ontologyBLASTP
465764466054291hypothetical proteinBLASTP
466490466915426hypothetical proteinBLASTP
467145467312168hypothetical proteinBLASTP
4673274698972571enhancing factor viralQuickGO ontologyBLASTP
47033147040676tRNA-PheQuickGO ontologyBLASTP
470551471126576putative TetR-family regulatory proteinQuickGO ontologyBLASTP
4715464735612016putative oxidoreductaseQuickGO ontologyBLASTP
4735844741415584Fe-4S ferrodoxinQuickGO ontologyBLASTP
4741644763112148formate dehydrogenase HQuickGO ontologyBLASTP
4763734781601788thioldisulfide interchange protein precursorQuickGO ontologyBLASTP
478136478495360putative cation tolerance proteinQuickGO ontologyBLASTP