Pre_GI: BLASTP Hits

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Query: NC_011982:206784:225258 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Start: 225258, End: 225950, Length: 693

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003065:27163:300383003830409372Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencehypothetical protein4e-40164
NC_015675:6538500:655225765522576553003747Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator4e-1891.7
NC_014923:5970182:599758959975895998335747Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeAutoinducer-binding domain protein4e-1891.7
NC_019973:5899142:592654659265465927292747Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain4e-1891.7
NC_011894:983572:101237610123761013104729Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LuxR family1e-1479.7
NC_020453:1025891:102750510275051028296792Agromonas oligotrophica S58 DNA, complete genomehypothetical protein2e-1479.3
NC_015259:485015:532878532878533531654Polymorphum gilvum SL003B-26A1 chromosome, complete genomeLuxR family transcriptional regulator2e-1479
NC_010172:5036385:503965450396545040385732Methylobacterium extorquens PA1, complete genomeAutoinducer-binding domain protein8e-1477.4
NC_013716:3109700:312693731269373127629693Citrobacter rodentium ICC168, complete genomequorum sensing transcriptional regulator CroR7e-1477.4
NC_014923:5868000:587372958737295874466738Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeAutoinducer-binding domain protein1e-1376.6
NC_019973:5797000:580268958026895803426738Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain1e-1376.6
NC_015675:6423000:642840064284006429137738Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator1e-1376.6
NC_020211:554736:562400562400563116717Serratia marcescens WW4, complete genometranscriptional activator protein2e-1375.9
NC_015259:734795:739811739811740503693Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative N-acyl homoserine lactone transcriptional regulator, LuxR-like protein5e-1374.7
NC_009254:329700:339382339382340164783Burkholderia vietnamiensis G4 chromosome 3, complete sequenceresponse regulator receiver protein5e-1374.7
NC_010681:121647:144448144448145068621Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, LuxR family1e-1273.6
NC_019973:5650646:568189956818995682624726Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain3e-1272.4
NC_015675:6276357:630761063076106308335726Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator3e-1272.4
NC_010611:154307:155484155484156200717Acinetobacter baumannii ACICU, complete genomeDNA-binding HTH domain-containing protein2e-1169.7
NC_014618:2139639:215415321541532154866714Enterobacter cloacae SCF1 chromosome, complete genomeLuxR family transcriptional regulator2e-1168.9
NC_016603:3259432:326063032606303261346717Acinetobacter calcoaceticus PHEA-2 chromosome, complete genometranscriptional activator of quorum sensing autoinducer synthesis transcription regulator protein4e-1168.6
NC_008391:2045348:205893020589302059619690Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, LuxR family4e-1168.6
NC_010410:3777076:379324937932493793965717Acinetobacter baumannii AYE, complete genomeputative Autoinducer-binding transcriptional regulator (LuxR family)5e-1168.2
NC_011586:164746:165921165921166637717Acinetobacter baumannii AB0057 chromosome, complete genomeeR transcriptional regulator5e-1168.2
NC_011595:3607402:362357536235753624291717Acinetobacter baumannii AB307-0294, complete genometranscriptional activator protein phzR5e-1168.2
NC_017171:155836:157012157012157728717Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeautoinducer-binding transcriptional regulator5e-1168.2
NC_017387:147906:149082149082149798717Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeautoinducer-binding transcriptional regulator5e-1168.2
NC_014259:3984568:400097840009784001694717Acinetobacter sp. DR1 chromosome, complete genomeTranscriptional activator protein phzR5e-1168.2
NC_014834:2206119:223396822339682234687720Rhodopseudomonas palustris DX-1 chromosome, complete genomeautoinducer-binding domain-containing protein5e-1168.2
NC_012880:135508:146864146864147574711Dickeya dadantii Ech703, complete genometranscriptional regulator, LuxR family4e-1168.2
NC_015259:673662:679113679113679880768Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTranscriptional regulator, LuxR family6e-1167.8
NC_004463:1992000:203431920343192035080762Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein7e-1167.4
NC_014258:127500:136873136873137565693Pantoea vagans C9-1 plasmid pPag3, complete sequencetranscriptional activator protein PagR8e-1167.4
NC_016027:194842:203812203812204525714Gluconacetobacter xylinus NBRC 3288, complete genomeN-acylhomoserine lactone-dependent regulatory protein9e-1167.4
NC_014834:614890:624618624618625346729Rhodopseudomonas palustris DX-1 chromosome, complete genomeautoinducer-binding domain-containing protein2e-1065.9
NC_016818:2836851:285495428549542855640687Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeDNA-binding protein2e-1065.9
NC_016816:2953530:298349529834952984217723Pantoea ananatis LMG 5342, complete genometranscriptional activator protein PhzR2e-1065.9
NC_017168:2999514:300692830069283007665738Yersinia pestis A1122 chromosome, complete genomequorum-sensing transcriptional activator YpeR3e-1065.5
NC_005810:2508671:252469225246922525429738Yersinia pestis biovar Microtus str. 91001, complete genomequorum-sensing transcriptional activator YpeR3e-1065.5
NC_003143:2741478:275476827547682755505738Yersinia pestis CO92, complete genomequorum-sensing transcriptional activator YpeR3e-1065.5
NC_008150:2173708:218657821865782187315738Yersinia pestis Antiqua, complete genomequorum-sensing transcriptional activator YpeR3e-1065.5
NC_004088:1909880:191632619163261917063738Yersinia pestis KIM, complete genometranscriptional activator protein3e-1065.5
NC_009085:131000:132302132302132898597Acinetobacter baumannii ATCC 17978, complete genomeeR transcriptional regulator4e-1064.7
NC_014500:4691915:471160847116084712360753Dickeya dadantii 3937 chromosome, complete genomeDNA-binding transcriptional regulatory protein ExpR8e-1063.9
NC_012988:5516872:552180955218095522306498Methylobacterium extorquens DM4, complete genomeN-acylhomoserine lactone LuxR family transcriptional regulator8e-1063.9
NC_007958:2423335:242646424264642427186723Rhodopseudomonas palustris BisB5, complete genomeregulatory protein, LuxR3e-0962
NC_014394:1594071:159742715974271598158732Gallionella capsiferriformans ES-2 chromosome, complete genometranscriptional regulator, LuxR family3e-0962
NC_011004:2507566:251411225141122514834723Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, LuxR family5e-0961.6
NC_016514:2950860:295410229541022954824723Enterobacter cloacae EcWSU1 chromosome, complete genomeregulatory protein SdiA4e-0961.6
NC_012779:2755338:276783827678382768557720Edwardsiella ictaluri 93-146, complete genomeAHL-dependent transcriptional regulator4e-0961.6
NC_005773:1851116:187462718746271875328702Pseudomonas syringae pv. phaseolicola 1448A, complete genomeautoinducer transcriptional regulator AhlR7e-0960.8
NC_007778:3784104:379951837995183800240723Rhodopseudomonas palustris HaA2, complete genometranscriptional regulator, LuxR family7e-0960.8
NC_010682:460523:492274492274493035762Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, LuxR family1e-0860.1
NC_010557:207846:211136211136211855720Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LuxR family2e-0859.3
NC_020453:6821500:683645968364596837193735Agromonas oligotrophica S58 DNA, complete genometranscriptional regulator, LuxR family6e-0857.8
NC_010694:1052722:106386710638671064589723Erwinia tasmaniensis, complete genomeTranscriptional activator protein5e-0857.8
NC_009436:2685910:270101327010132701735723Enterobacter sp. 638, complete genomeDNA-binding transcriptional activator SdiA3e-0755.5
NC_010676:304405:325754325754326458705Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, LuxR family3e-0755.5
NC_008150:317903:325409325409326152744Yersinia pestis Antiqua, complete genomequorum-sensing transcriptional regulator4e-0755.1
NC_010634:3720214:375114637511463751889744Yersinia pseudotuberculosis PB1/+, complete genomeLuxR family transcriptional regulator4e-0755.1
NC_010159:172469:193682193682194425744Yersinia pestis Angola, complete genometranscriptional regulator, LuxR family4e-0755.1
NC_006155:3805640:383807438380743838817744Yersinia pseudotuberculosis IP 32953, complete genomeQuorum-sensing transcriptional regulator4e-0755.1
NC_003143:1059580:109199410919941092737744Yersinia pestis CO92, complete genomequorum-sensing transcriptional regulator4e-0755.1
NC_005810:3917254:392651139265113927254744Yersinia pestis biovar Microtus str. 91001, complete genomequorum-sensing transcriptional regulator4e-0755.1
NC_010465:893921:900476900476901219744Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, LuxR family4e-0755.1
NC_008149:3556999:358796835879683588711744Yersinia pestis Nepal516, complete genomequorum-sensing transcriptional regulator4e-0755.1
NC_004088:3689000:372009637200963720839744Yersinia pestis KIM, complete genometranscriptional activator4e-0755.1
NC_009708:874770:881339881339882082744Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeLuxR family transcriptional regulator4e-0755.1
NC_014029:961522:968094968094968837744Yersinia pestis Z176003 chromosome, complete genomequorum-sensing transcriptional regulator4e-0755.1
NC_017154:902739:910246910246910989744Yersinia pestis D106004 chromosome, complete genomequorum-sensing transcriptional regulator4e-0755.1
NC_017160:905783:912355912355913098744Yersinia pestis D182038 chromosome, complete genomequorum-sensing transcriptional regulator4e-0755.1
NC_017168:3286:125371253713280744Yersinia pestis A1122 chromosome, complete genomequorum-sensing transcriptional regulator4e-0755.1
NC_017265:809943:816515816515817258744Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,quorum-sensing transcriptional regulator4e-0755.1
NC_014923:2672000:267549126754912676213723Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeAutoinducer-binding domain protein4e-0755.1
NC_015675:2839000:284249128424912843213723Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator4e-0755.1
NC_019973:2744000:274754427475442748266723Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain4e-0755.1
NC_009381:588137:594691594691595434744Yersinia pestis Pestoides F chromosome, complete genomequorum-sensing transcriptional regulator5e-0754.7
NC_015637:325561:342547342547343269723Vibrio anguillarum 775 chromosome chromosome II, complete sequenceLuxR family transcriptional regulator7e-0754.3
NC_010514:6000:278042780428550747Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, completetranscriptional regulator, LuxR family9e-0753.9
NC_007802:1093785:111506011150601115791732Jannaschia sp. CCS1, complete genometranscriptional regulator, LuxR family1e-0653.5
NC_014837:3633378:364479836447983645586789Pantoea sp. At-9b chromosome, complete genomeLuxR family transcriptional regulator1e-0653.5
NC_010125:2884762:293002229300222930741720Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, luxR family1e-0653.5
NC_010995:1417329:143831214383121439028717Cellvibrio japonicus Ueda107, complete genomeputative two-component transcriptional regulator, LuxR family2e-0652.4
NC_014837:1570500:157253015725301573252723Pantoea sp. At-9b chromosome, complete genomeLuxR family transcriptional regulator4e-0651.6
NC_014817:29795:536405364054386747Asticcacaulis excentricus CB 48 chromosome 2, complete sequencetranscriptional regulator, luxr family7e-0650.8
NC_003296:941920:978998978998979744747Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTIONAL ACTIVATOR OF QUORUM SENSING AUTOINDUCER SYNTHESIS TRANSCRIPTION REGULATOR PROTEIN8e-0650.8