Pre_GI: BLASTP Hits

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Query: NC_011770:2499432:2550676 Pseudomonas aeruginosa LESB58, complete genome

Start: 2550676, End: 2556972, Length: 6297

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:2467219:2493939249393925002356297Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein03759
NC_018080:2288700:2332116233211623384126297Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein03747
NC_009656:2512733:2541001254100125472976297Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein03735
NC_010512:1196616:1196616119661612029126297Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceserine/threonine protein kinase02387
NC_008060:1544920:1562247156224715685526306Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceserine/threonine protein kinase02383
NC_008544:615448:6154486154486217536306Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceserine/threonine protein kinase02383
NC_002516:3079850:3079850307985030834823633Pseudomonas aeruginosa PAO1, complete genomehypothetical protein02038
NC_002516:3079850:3083485308348530861452661Pseudomonas aeruginosa PAO1, complete genomehypothetical protein01541
NC_013205:1548500:1608001160800116122124212Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Superfamily I DNA and RNA helicase and helicase subunits-like protein3e-74281
NC_016048:2678205:2686090268609026907154626Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein3e-56222
NC_014365:2810405:2822643282264328290716429Desulfarculus baarsii DSM 2075 chromosome, complete genomeDNA helicase related protein4e-52208
NC_008576:357893:3653283653283712495922Magnetococcus sp. MC-1, complete genomesuperfamily I DNA and RNA helicase and helicase subunit4e-51204
NC_002947:4167500:4201148420114842077716624Pseudomonas putida KT2440, complete genomeDNA helicase-related protein7e-51204
NC_012028:451982:4730084730084812878280Halorubrum lacusprofundi ATCC 49239 chromosome 2, complete genometype III restriction protein res subunit1e-50203
NC_010334:2090990:2090990209099020967405751Shewanella halifaxensis HAW-EB4, complete genomehypothetical protein2e-50202
NC_013947:3080290:3092360309236030977655406Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein6e-50201
NC_016642:471656:4748764748764816436768Pseudovibrio sp. FO-BEG1 chromosome, complete genomehypothetical protein7e-50201
NC_008751:1043269:1062386106238610682625877Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeconserved hypothetical protein, putative DNA helicase2e-49199
NC_007492:2203220:2209453220945322148645412Pseudomonas fluorescens PfO-1, complete genomeDNA helicase-related protein2e-49199
NC_011884:3099488:3123213312321331283815169Cyanothece sp. PCC 7425, complete genomehypothetical protein2e-49199
NC_013173:1305916:1321479132147913273585880Desulfomicrobium baculatum DSM 4028, complete genomeconserved hypothetical protein, putative DNA helicase4e-49198
NC_014221:2392150:2407750240775024132095460Truepera radiovictrix DSM 17093 chromosome, complete genometranscription elongation factor GreA/GreB domain protein3e-49198
NC_015216:2070756:2077641207764120828005160Methanobacterium sp. AL-21 chromosome, complete genomeDNA helicase-like protein3e-48195
NC_010552:752007:7597217597217663146594Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceDNA helicase related protein4e-48195
NC_013235:1218378:1233313123331312389165604Nakamurella multipartita DSM 44233, complete genomeputative superfamily I DNA and RNA helicase protein6e-47191
NC_015703:3880903:3893805389380539000416237Runella slithyformis DSM 19594 chromosome, complete genometranscription elongation factor GreA/GreB domain-containing protein1e-46190
NC_003902:2469500:2469862246986224765366675Xanthomonas campestris pv. campestris str. ATCC 33913, completeDNA helicase related protein1e-46190
NC_007086:2477040:2502709250270925091796471Xanthomonas campestris pv. campestris str. 8004, complete genomeDNA helicase related protein1e-46190
NC_011901:1860887:1881132188113218858594728Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein2e-46189
NC_011761:1357799:1357799135779913643956597Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein2e-46189
NC_008705:868623:8736718736718800486378Mycobacterium sp. KMS, complete genomeconserved hypothetical protein, putative DNA helicase2e-46189
NC_008146:861319:8663678663678727446378Mycobacterium sp. MCS, complete genomeconserved hypothetical protein, putative DNA helicase2e-46189
NC_014376:3009403:3009403300940330144545052Clostridium saccharolyticum WM1 chromosome, complete genomehelicase4e-46188
NC_015137:2582467:2596997259699726036236627Burkholderia sp. CCGE1001 chromosome 2, complete sequenceDNA helicase-like protein3e-46188
NC_015125:1668780:1668780166878016752746495Microbacterium testaceum StLB037, complete genomesuperfamily I DNA and RNA helicase and helicase subunits1e-45186
NC_007948:1972290:2012625201262520189156291Polaromonas sp. JS666, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-like1e-45186
NC_017904:2162045:2181591218159121880436453Mycobacterium sp. MOTT36Y chromosome, complete genomeDNA helicase2e-45186
NC_008596:1302000:1327732132773213339086177Mycobacterium smegmatis str. MC2 155, complete genomehypothetical protein3e-45185
NC_008380:2210649:2250685225068522561625478Rhizobium leguminosarum bv. viciae 3841, complete genomehypothetical protein8e-45184
NC_013132:893849:9126829126829173614680Chitinophaga pinensis DSM 2588, complete genomeDNA/RNA helicase6e-45184
NC_009675:4281249:4290307429030742942933987Anaeromyxobacter sp. Fw109-5 chromosome, complete genomehypothetical protein1e-44183
NC_018000:4958637:4977255497725549828165562Sinorhizobium fredii USDA 257 chromosome, complete genomeATP-dependent helicase2e-44182
NC_013971:2408522:2417498241749824230115514Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein2e-44182
NC_013961:2370994:2379970237997023854835514Erwinia amylovora, complete genomeSuperfamily I DNA and RNA helicase and helicase subunits-like protein2e-44182
NC_007086:2887875:2900965290096529065715607Xanthomonas campestris pv. campestris str. 8004, complete genomeDNA helicase related protein4e-44181
NC_014408:806720:8067208067208115104791Methanothermobacter marburgensis str. Marburg chromosome, completeDNA helicase related protein1e-42176
NC_014306:3006028:3017915301791530237915877Erwinia billingiae Eb661, complete genomeSuperfamily I DNA and RNA helicase subunit4e-42175
NC_005877:198522:2033562033562071833828Picrophilus torridus DSM 9790, complete genomeDNA helicase8e-42174
NC_010172:480000:5091665091665153036138Methylobacterium extorquens PA1, complete genomehypothetical protein6e-41171
NC_014774:1120383:1120383112038311257435361Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completehypothetical protein9e-41170
NC_016629:3789554:3809766380976638149855220Desulfovibrio africanus str. Walvis Bay chromosome, completehypothetical protein1e-40170
NC_016625:1259778:1265459126545912701294671Burkholderia sp. YI23 chromosome 2, complete sequenceputative DNA helicase-like protein1e-39167
NC_014310:279912:2959372959373015675631Ralstonia solanacearum PSI07 megaplasmid, complete sequenceDNA helicase-like protein1e-39167
NC_009952:997950:1009203100920310138824680Dinoroseobacter shibae DFL 12, complete genomeputative DNA helicase related protein5e-40167
NC_008942:1446682:1466548146654814712664719Methanocorpusculum labreanum Z, complete genomehypothetical protein5e-39165
NC_000853:648075:6480756480756519443870Thermotoga maritima MSB8, complete genomehypothetical protein6e-39164
NC_015740:3631326:3639493363949336442654773Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeDNA/RNA helicase1e-38164
NC_018581:2768743:2789405278940527953985994Gordonia sp. KTR9 chromosome, complete genomeSuperfamily I DNA and RNA helicase and helicase subunits1e-38163
NC_013642:400651:4133214133214171633843Thermotoga naphthophila RKU-10, complete genomeAAA ATPase1e-38163
NC_010943:3069082:3076745307674530788082064Stenotrophomonas maltophilia K279a, complete genomehypothetical protein3e-38162
NC_016943:3270308:3270308327030832762265919Blastococcus saxobsidens DD2, complete genomeputative ATP-dependent helicase4e-38161
NC_009050:212270:2462342462342526056372Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceSuperfamily I DNA and RNA helicases and helicase subunits-like protein5e-38161
NC_011769:2542000:2549908254990825554935586Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeputative superfamily I DNA and RNA helicase protein3e-35152
NC_012483:1813521:1823766182376618278334068Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein4e-34148
NC_000908:160072:1758051758051791463342Mycoplasma genitalium G37, complete genomehypothetical protein4e-32142
NC_013929:4549988:4582917458291745884545538Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-1999.4
NC_015942:3090275:3109116310911631136664551Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein6e-1998.2
NC_007333:810381:8395388395388440104473Thermobifida fusca YX, complete genomesimilar to Superfamily I DNA and RNA helicases and helicase subunits6e-1998.2
NC_010803:634497:6478486478486527404893Chlorobium limicola DSM 245, complete genomesuperfamily I DNA and RNA helicase subunits-like protein2e-1792.8
NC_014328:180482:1922491922491963344086Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein7e-1791.3
NC_007517:3430237:3439706343970634450785373Geobacter metallireducens GS-15, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-like6e-1688.2
NC_015660:1896904:1907447190744719118324386Geobacillus thermoglucosidasius C56-YS93 chromosome, completehypothetical protein3e-1586.3
NC_014650:1862165:1883998188399818883834386Geobacillus sp. Y4.1MC1 chromosome, complete genomehypothetical protein3e-1586.3
NC_014210:3248526:3248526324852632529954470Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,protein of unknown function DUF5595e-1585.1
NC_012563:122000:1268111268111308634053Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein8e-1481.3
NC_013165:413098:430057430057430995939Slackia heliotrinireducens DSM 20476, complete genome1e-1380.9
NC_012658:125500:1303561303561344084053Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein1e-1380.9
NC_010516:127000:1326561326561367084053Clostridium botulinum B1 str. Okra, complete genomehypothetical protein2e-1379.7
NC_016604:917972:9209989209989263585361Mycobacterium rhodesiae NBB3 chromosome, complete genomeIstB-like ATP binding protein3e-1379.3
NC_008698:903759:9088359088359107241890Thermofilum pendens Hrk 5, complete genomeAAA ATPase1e-1277
NC_010520:121077:1266381266381306904053Clostridium botulinum A3 str. Loch Maree, complete genomehypothetical protein2e-1276.6
NC_015425:2528549:2572938257293825766063669Clostridium botulinum BKT015925 chromosome, complete genomeDNA helicase3e-1276.3
NC_016906:181254:2187152187152222273513Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative DNA helicase5e-1275.5
NC_015385:2135456:2135456213545621384913036Treponema succinifaciens DSM 2489 chromosome, complete genomehypothetical protein1e-1174.3
NC_009699:122000:1276781276781317304053Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein9e-1274.3
NC_009495:128000:1328751328751369274053Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein9e-1274.3
NC_009697:120117:1256781256781297304053Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein9e-1274.3
NC_009698:120119:1256801256801297324053Clostridium botulinum A str. Hall chromosome, complete genomehypothetical protein9e-1274.3
NC_013851:3321853:3338309333830933417883480Allochromatium vinosum DSM 180 chromosome, complete genomeprotein of unknown function DUF5593e-1069.3
NC_013361:1335166:1353740135374013564212682Escherichia coli O26:H11 str. 11368 chromosome, complete genomeUvrD/REP helicase3e-0966.2
NC_013364:1306756:1325325132532513280062682Escherichia coli O111:H- str. 11128, complete genomeputative UvrD/REP helicase-like protein3e-0965.9
NC_013508:2587913:2616477261647726191642688Edwardsiella tarda EIB202, complete genomesuperfamily I DNA and RNA helicase5e-0965.5
NC_014298:251783:270902270902271726825Halalkalicoccus jeotgali B3 plasmid 1, complete sequenceDNA binding protein -like protein5e-0965.1
NC_016887:1949927:1957259195725919609063648Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein6e-0861.6
NC_015381:2859000:2862834286283428655932760Burkholderia gladioli BSR3 chromosome 1, complete sequenceATP-binding protein6e-0861.6
NC_005090:1033746:1058201105820110606482448Wolinella succinogenes DSM 1740, complete genomeATP-BINDING PROTEIN1e-0760.8
NC_006512:1722138:1728654172865417313862733Idiomarina loihiensis L2TR, complete genomeSuperfamily I DNA/RNA helicase2e-0759.7
NC_008268:1748635:1762421176242117677335313Rhodococcus sp. RHA1, complete genomepossible DNA helicase3e-0759.3
NC_008570:1143578:1147784114778411504802697Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein6e-0758.5
NC_018697:825058:8423578423578440601704Cycloclasticus sp. P1 chromosome, complete genomeProtein phosphatase 2C-like protein7e-0758.2
NC_012214:1117325:1128597112859711298681272Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein1e-0657.4
NC_014727:1136589:1143692114369211507327041Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA helicase1e-0657.4