Pre_GI Gene

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Host: NC_008544 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008544:615448 Burkholderia cenocepacia HI2424 chromosome 3, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6154486217536306serinethreonine protein kinaseQuickGO ontologyBLASTP
6217506230961347hypothetical proteinBLASTP
623178623915738hypothetical proteinBLASTP
6242446252571014tryptophanyl-tRNA synthetaseQuickGO ontologyBLASTP
625467625622156hypothetical proteinBLASTP
6261346290042871Rhs element Vgr proteinQuickGO ontologyBLASTP
6290406311212082phospholipase DTransphosphatidylaseQuickGO ontologyBLASTP
6312316327931563Sel1 domain protein repeat-containing proteinQuickGO ontologyBLASTP
633106633609504hypothetical proteinBLASTP
6338326361112280oxidoreductase alpha molybdopterin subunitQuickGO ontologyBLASTP
6362366390762841ATPase AAA-2 domain proteinQuickGO ontologyBLASTP
639711639980270hypothetical proteinBLASTP
640085640900816Linocin_M18 bacteriocin proteinQuickGO ontologyBLASTP
6408936419721080Dyp-type peroxidase familyQuickGO ontologyBLASTP