Pre_GI: BLASTP Hits

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Query: NC_011770:1811874:1830280 Pseudomonas aeruginosa LESB58, complete genome

Start: 1830280, End: 1831338, Length: 1059

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:1756434:1774674177467417757321059Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative HlyD family secretion protein2e-138492
NC_009092:261778:2718842718842729901107Shewanella loihica PV-4, complete genomesecretion protein HlyD family protein1e-21104
NC_008577:3485878:3487437348743734885311095Shewanella sp. ANA-3 chromosome 1, complete sequencesecretion protein HlyD family protein4e-1789.4
NC_004459:3243987:3267688326768832689171230Vibrio vulnificus CMCP6 chromosome I, complete sequenceMultidrug resistance efflux pump3e-1686.3
NC_010501:1286971:128946012894601290326867Pseudomonas putida W619, complete genomesecretion protein HlyD family protein3e-1272.8
NC_008313:2629281:2629281262928126303301050Ralstonia eutropha H16 chromosome 1, complete sequencemultidrug resistance efflux pump1e-1171.2
NC_014837:1873020:187712118771211877978858Pantoea sp. At-9b chromosome, complete genomesecretion protein HlyD family protein4e-1065.9
NC_021066:1712905:175562417556241756487864Raoultella ornithinolytica B6, complete genomeauxiliary transport protein, membrane fusion protein (MFP) family2e-0860.8
NC_012988:4353000:437126443712644372211948Methylobacterium extorquens DM4, complete genomeefflux pump component, secretion protein HlyD family2e-0860.5
NC_010794:654748:671685671685672647963Methylacidiphilum infernorum V4, complete genomeMultidrug resistance efflux pump2e-0860.5
NC_010468:111504:1234471234471245831137Escherichia coli ATCC 8739, complete genomesecretion protein HlyD family protein8e-0858.5
CU928145:4131924:4142133414213341432691137Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein7e-0858.5
NC_011748:4131924:4142133414213341432691137Escherichia coli 55989, complete genomehypothetical protein7e-0858.5
CP002185:3964500:3973233397323339743691137Escherichia coli W, complete genomesecretion protein HlyD family protein7e-0858.5
NC_009801:4073968:4083405408340540845411137Escherichia coli E24377A, complete genomemembrane fusion protein (MFP) (TC 8.A.1) family7e-0858.5
NC_009800:3787320:3796773379677337979091137Escherichia coli HS, complete genomemembrane fusion protein (MFP) (TC 8.A.1) family7e-0858.5
NC_010498:3988351:4005888400588840070241137Escherichia coli SMS-3-5, complete genomeauxiliary membrane fusion protein family transporter7e-0858.5
CP002516:119935:1317041317041328401137Escherichia coli KO11, complete genomesecretion protein HlyD family protein7e-0858.5
NC_016902:119935:1317041317041328401137Escherichia coli KO11FL chromosome, complete genomesecretion protein HlyD family protein7e-0858.5
NC_012967:3696877:3704936370493637060721137Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein7e-0858.5
NC_012947:126596:1383651383651395011137Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completesecretion protein HlyD7e-0858.5
NC_012759:3648500:3656592365659236577281137Escherichia coli BW2952 chromosome, complete genomehypothetical protein7e-0858.5
NC_011415:4006500:4015302401530240164381137Escherichia coli SE11 chromosome, complete genomehypothetical protein7e-0858.5
NC_004337:3590323:3736323373632337374081086Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-0758.2
NC_013353:4707712:4712357471235747134931137Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-0757.8
AP010958:4707712:4712357471235747134931137Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein1e-0757.8
NC_008601:753221:773934773934774791858Francisella tularensis subsp. novicida U112, complete genomemembrane fusion protein1e-0757.4
NC_009997:5188221:522317752231775224040864Shewanella baltica OS195, complete genomesecretion protein HlyD family protein2e-0757
NC_016901:5130147:516379951637995164662864Shewanella baltica OS678 chromosome, complete genomesecretion protein HlyD family protein2e-0757
NC_011663:5016488:503346450334645034327864Shewanella baltica OS223 chromosome, complete genomesecretion protein HlyD family protein3e-0756.2
NC_009665:5072413:510726451072645108127864Shewanella baltica OS185 chromosome, complete genomesecretion protein HlyD family protein4e-0756.2
NC_009832:110239:1249231249231260591137Serratia proteamaculans 568, complete genomesecretion protein HlyD family protein5e-0755.8
NC_009654:91096:1080051080051090691065Marinomonas sp. MWYL1, complete genomesecretion protein HlyD family protein6e-0755.5
NC_015224:4028150:403010740301074031042936Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,p-hydroxybenzoic acid efflux subunit AaeA2e-0653.9
NC_007613:4156841:4158892415889241599231032Shigella boydii Sb227, complete genomehypothetical protein2e-0653.9
CP002185:4566150:4568201456820145692321032Escherichia coli W, complete genomepredicted multidrug efflux system component2e-0653.5
NC_011751:4795928:4795928479592847969591032Escherichia coli UMN026 chromosome, complete genomemultidrug resistance protein MdtN3e-0653.5
NC_013364:5040268:5042319504231950433501032Escherichia coli O111:H- str. 11128, complete genomeputative membrane fusion protein of efflux pump3e-0653.1
NC_017075:1970168:197235719723571973289933Rubrivivax gelatinosus IL144, complete genomesecretion protein HlyD family protein4e-0652.8
NC_009800:4332229:4334280433428043353111032Escherichia coli HS, complete genomemultidrug resistance protein MdtN7e-0652
NC_004088:179775:183132183132184067936Yersinia pestis KIM, complete genomehypothetical protein1e-0551.6
NC_008150:4140804:415426341542634155198936Yersinia pestis Antiqua, complete genomeputative HlyD family secretion protein1e-0551.6
NC_003143:4105754:411922341192234120158936Yersinia pestis CO92, complete genomeputative HlyD family secretion protein1e-0551.6
NC_005810:4381182:438487443848744385809936Yersinia pestis biovar Microtus str. 91001, complete genomep-hydroxybenzoic acid efflux subunit AaeA1e-0551.6
NC_010159:1208699:121239712123971213332936Yersinia pestis Angola, complete genomep-hydroxybenzoic acid efflux pump subunit AaeA1e-0551.6
NC_006155:4210606:421429942142994215234936Yersinia pseudotuberculosis IP 32953, complete genomeputative HlyD family secretion protein1e-0551.6
NC_010634:4150763:415445641544564155391936Yersinia pseudotuberculosis PB1/+, complete genomesecretion protein HlyD family protein1e-0551.6
NC_008149:3966586:396994339699433970878936Yersinia pestis Nepal516, complete genomeHlyD family secretion protein1e-0551.6
NC_009381:321577:335047335047335982936Yersinia pestis Pestoides F chromosome, complete genomep-hydroxybenzoic acid efflux subunit AaeA1e-0551.6
NC_014029:4057696:407116540711654072100936Yersinia pestis Z176003 chromosome, complete genomeputative HlyD family secretion protein1e-0551.6
NC_017154:3997810:401127940112794012214936Yersinia pestis D106004 chromosome, complete genomeputative HlyD family secretion protein1e-0551.6
NC_017160:3986844:399020139902013991136936Yersinia pestis D182038 chromosome, complete genomeputative HlyD family secretion protein1e-0551.6
NC_017168:1729922:174339117433911744326936Yersinia pestis A1122 chromosome, complete genomep-hydroxybenzoic acid efflux subunit AaeA1e-0551.6
NC_017265:4171500:417407941740794175014936Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,p-hydroxybenzoic acid efflux pump subunit AaeA1e-0551.6
NC_010465:522649:536098536098537033936Yersinia pseudotuberculosis YPIII, complete genomesecretion protein HlyD family protein9e-0651.6
NC_009708:483253:496906496906497841936Yersinia pseudotuberculosis IP 31758 chromosome, complete genomep-hydroxybenzoic acid efflux subunit AaeA1e-0551.2