Pre_GI Gene

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Host: NC_012947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:126596 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1265961314464851YadA domain proteinQuickGO ontologyBLASTP
131490132173684inner membrane lipoproteinQuickGO ontologyBLASTP
132717133079363hypothetical proteinBLASTP
133364133573210cytoplasmic proteinQuickGO ontologyBLASTP
133585134172588mannitol repressor proteinQuickGO ontologyBLASTP
1341721353201149mannitol-1-phosphate 5-dehydrogenaseQuickGO ontologyBLASTP
1355501374631914PTS system mannitol-specific IIC subunitQuickGO ontologyBLASTP
138000138362363hypothetical proteinBLASTP
1383651395011137secretion protein HlyDQuickGO ontologyBLASTP
139961140398438hypothetical proteinBLASTP
141105141566462hypothetical proteinBLASTP
141578142516939RHS proteinQuickGO ontologyBLASTP
142564143406843hypothetical proteinBLASTP
143427144299873Rhs family protein-like proteinQuickGO ontologyBLASTP
144528145136609glutathione S-transferaseQuickGO ontologyBLASTP
1452341466251392selenocysteine synthaseQuickGO ontologyBLASTP
1466221484661845selenocysteinyl-tRNA-specific translation factorQuickGO ontologyBLASTP
1486561498071152alcohol dehydrogenaseQuickGO ontologyBLASTP
1499721515101539aldehyde dehydrogenase NADQuickGO ontologyBLASTP
151729151941213hypothetical protein
152055152378324hypothetical proteinBLASTP