Pre_GI Gene

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Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:3988351 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
398835139895021152alcohol dehydrogenase IIQuickGO ontologyBLASTP
398969339915371845selenocysteine-specific translation elongation factorQuickGO ontologyBLASTP
399153439929251392L-seryl-tRNA selenium transferaseQuickGO ontologyBLASTP
39930233993631609glutathione S-transferaseQuickGO ontologyBLASTP
399378839975973810outer membrane autotransporterQuickGO ontologyBLASTP
39977693998287519putative fimbrial protein FanHQuickGO ontologyBLASTP
39982803998702423putative fimbrial protein FanGQuickGO ontologyBLASTP
39988153999786972putative fimbrial protein FanFQuickGO ontologyBLASTP
39998164000496681putative fimbrial assembly chaperone FanEQuickGO ontologyBLASTP
400050440028612358putative fimbrial usher protein FanDQuickGO ontologyBLASTP
40029334003460528putative fimbrial protein FanCQuickGO ontologyBLASTP
40042054004711507sigma-70 domain-containing proteinQuickGO ontologyBLASTP
40049024005732831putative fimbrial operon positive regulatory protein FanRQuickGO ontologyBLASTP
400588840070241137auxiliary membrane fusion protein family transporterQuickGO ontologyBLASTP
40070274007491465hypothetical proteinBLASTP
400792540098381914PTS system mannitol-specific IIABC componentQuickGO ontologyBLASTP
400993340110811149mannitol-1-phosphate 5-dehydrogenaseQuickGO ontologyBLASTP
40110814011668588mannitol operon repressorQuickGO ontologyBLASTP
40116794011888210hypothetical proteinBLASTP
40121724012534363hypothetical proteinBLASTP
40127904013017228hypothetical protein
40130924013775684putative lipoproteinQuickGO ontologyBLASTP
401381940184684650haemagluttinin family proteinQuickGO ontologyBLASTP