Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:261778 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2617782624736964Fe-4S ferredoxin iron-sulfur binding domain proteinQuickGO ontologyBLASTP
2624832655213039molydopterin dinucleotide-binding regionQuickGO ontologyBLASTP
265675266292618hypothetical protein
266599266994396hypothetical protein
267039267596558GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
268052268594543GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
2686052697831179transcriptional regulator MerR familyQuickGO ontologyBLASTP
270161270757597phage integrase family proteinQuickGO ontologyBLASTP
270902271894993hypothetical proteinBLASTP
2718842729901107secretion protein HlyD family proteinQuickGO ontologyBLASTP
273010273519510hypothetical protein
273651274331681ion transport 2 domain proteinQuickGO ontologyBLASTP
274860275438579hypothetical proteinBLASTP
2755742776522079peptidase S9 prolyl oligopeptidase active site domain proteinQuickGO ontologyBLASTP
277754278701948hypothetical proteinBLASTP
278814279215402hypothetical proteinBLASTP
279538280386849hypothetical proteinBLASTP
280637280948312hypothetical proteinBLASTP
2809662824201455protein of unknown function UPF0061QuickGO ontologyBLASTP
282491282796306hypothetical proteinBLASTP
2827932837941002aminoglycoside phosphotransferaseQuickGO ontologyBLASTP
283924284535612DSBA oxidoreductaseQuickGO ontologyBLASTP