Pre_GI: BLASTP Hits

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Query: NC_011769:3434744:3462717 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 3462717, End: 3463682, Length: 966

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013223:1349000:136491413649141365885972Desulfohalobium retbaense DSM 5692, complete genomeType II secretion system F domain protein9e-57220
NC_016002:2453919:249578124957812496755975Pseudogulbenkiania sp. NH8B, complete genometype II secretion system F domain containing protein3e-55215
NC_007614:2675302:267990926799092680880972Nitrosospira multiformis ATCC 25196 chromosome 1, completetype II secretion system protein2e-49196
NC_011027:1570955:160219716021971603165969Chlorobaculum parvum NCIB 8327, complete genometype II secretion system protein5e-49194
NC_002932:440191:455327455327456244918Chlorobium tepidum TLS, complete genomeTadB protein2e-46186
NC_016613:2759908:277448427744842775452969Vibrio sp. EJY3 chromosome 1, complete sequencetight adherence TadB-like transmembrane protein6e-43174
NC_007498:2046935:205091920509192051896978Pelobacter carbinolicus DSM 2380, complete genomeFlp pilus assembly protein TadB2e-42172
NC_021171:4549673:456131845613184562301984Bacillus sp. 1NLA3E, complete genometype II secretion system F domain-containing protein2e-39162
NC_011894:2618951:265750026575002658444945Methylobacterium nodulans ORS 2060, complete genometype II secretion system protein6e-37154
NC_016884:813000:821307821307822224918Sulfobacillus acidophilus DSM 10332 chromosome, complete genometype II secretion system F domain-containing protein5e-35148
NC_015757:2844599:285604128560412856970930Sulfobacillus acidophilus TPY chromosome, complete genomeType II secretion system F domain protein5e-35148
NC_008536:5259438:527572152757215276686966Solibacter usitatus Ellin6076, complete genometype II secretion system protein1e-34147
NC_018867:361423:380079380079381026948Dehalobacter sp. CF chromosome, complete genomeFlp pilus assembly protein TadB2e-34146
NC_010334:2749250:275746327574632758440978Shewanella halifaxensis HAW-EB4, complete genometype II secretion system protein6e-31134
NC_007794:1553000:156780915678091568795987Novosphingobium aromaticivorans DSM 12444, complete genometype II secretion system protein2e-30133
NC_009901:2427291:244584524458452446822978Shewanella pealeana ATCC 700345, complete genometype II secretion system protein5e-30131
NC_008609:2933468:293953529395352940500966Pelobacter propionicus DSM 2379, complete genometype II secretion system protein1e-29130
NC_008541:3282415:330340633034063304338933Arthrobacter sp. FB24 chromosome 1, complete sequencetype II secretion system protein4e-29129
NC_008541:3282415:329572832957283296678951Arthrobacter sp. FB24 chromosome 1, complete sequencetype II secretion system protein1e-28127
NC_011894:3885490:390713739071373908120984Methylobacterium nodulans ORS 2060, complete genometype II secretion system protein8e-26117
NC_015588:95697:108643108643109572930Isoptericola variabilis 225 chromosome, complete genomeType II secretion system F domain protein6e-25115
NC_010338:4530403:455321545532154554192978Caulobacter sp. K31, complete genometype II secretion system protein3e-24112
NC_011886:2950411:297992329799232980855933Arthrobacter chlorophenolicus A6, complete genometype II secretion system protein3e-24112
NC_014830:532122:5450575450575470151959Intrasporangium calvum DSM 43043 chromosome, complete genomeType II secretion system F domain7e-24111
NC_008786:266959:271026271026271898873Verminephrobacter eiseniae EF01-2, complete genometype II secretion system protein8e-23107
NC_011886:2950411:297252029725202973470951Arthrobacter chlorophenolicus A6, complete genometype II secretion system protein5e-2098.6
NC_010501:908000:934781934781935662882Pseudomonas putida W619, complete genometype II secretion system protein2e-1996.7
NC_007333:2674596:267993426799342680866933Thermobifida fusca YX, complete genomeputative integral membrane protein2e-1893.6
NC_010718:2460893:246233124623312463322992Natranaerobius thermophilus JW/NM-WN-LF, complete genome4e-1892.4
NC_004463:3857763:3865865386586538668811017Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein1e-1687
NC_014152:397177:399681399681400622942Thermincola sp. JR, complete genomeType II secretion system F domain protein6e-1581.6
NC_013716:4306695:437223843722384373140903Citrobacter rodentium ICC168, complete genomeputative tight adherence protein B1e-1480.5
NC_008800:3955284:396767339676733968515843Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative tight adherance operon protein5e-1479
NC_015224:3820338:384611838461183846789672Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,type II secretion system protein F domain protein2e-1377
NC_010465:733916:742221742221743096876Yersinia pseudotuberculosis YPIII, complete genometype II secretion system protein2e-1376.6
NC_004088:3859173:387126138712613872073813Yersinia pestis KIM, complete genomehypothetical protein6e-1375.1
NC_010634:3905369:392144039214403922315876Yersinia pseudotuberculosis PB1/+, complete genometype II secretion system protein6e-1375.1
NC_010159:259695:271720271720272595876Yersinia pestis Angola, complete genometype II secretion system protein F domain protein6e-1375.1
NC_005810:3333000:334240133424013343276876Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein6e-1375.1
NC_008149:650706:659997659997660872876Yersinia pestis Nepal516, complete genomemembrane protein6e-1375.1
NC_008150:3430000:344208034420803442955876Yersinia pestis Antiqua, complete genomehypothetical protein6e-1375.1
NC_003143:741169:750459750459751334876Yersinia pestis CO92, complete genomehypothetical protein6e-1375.1
NC_006155:3992818:400997940099794010854876Yersinia pseudotuberculosis IP 32953, complete genomeputative integral membrane protein.6e-1375.1
NC_017265:3724500:373655837365583737433876Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Flp pilus assembly protein TadB6e-1375.1
NC_017168:341233:353968353968354843876Yersinia pestis A1122 chromosome, complete genomehypothetical protein6e-1375.1
NC_017160:737000:746344746344747219876Yersinia pestis D182038 chromosome, complete genomehypothetical protein6e-1375.1
NC_017154:734875:744166744166745041876Yersinia pestis D106004 chromosome, complete genomehypothetical protein6e-1375.1
NC_014029:792719:802003802003802878876Yersinia pestis Z176003 chromosome, complete genomehypothetical protein6e-1375.1
NC_009381:522731:532020532020532895876Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein6e-1375.1
NC_009708:692508:701852701852702727876Yersinia pseudotuberculosis IP 31758 chromosome, complete genometype II secretion system protein F domain8e-1374.7
NC_006512:952894:956909956909957610702Idiomarina loihiensis L2TR, complete genomeFlp pilus assembly protein TadB5e-1272
NC_010718:2460893:246133624613362462289954Natranaerobius thermophilus JW/NM-WN-LF, complete genometype II secretion system protein6e-1272
NC_020291:1871846:187184618718461872760915Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeFlp pilus assembly protein TadB1e-1171.2
NC_013385:759420:781240781240782097858Ammonifex degensii KC4, complete genomeFlp pilus assembly protein TadB-like protein5e-1168.9
NC_012791:4680500:468985546898554690580726Variovorax paradoxus S110 chromosome 1, complete genometype II secretion system protein5e-1168.9
NC_014966:638355:653023653023653940918Vibrio vulnificus MO6-24/O chromosome II, complete sequenceFlp pilus assembly protein TadB7e-1168.6
NC_004460:81687:964289642897342915Vibrio vulnificus CMCP6 chromosome II, complete sequenceFlp pilus assembly protein TadB8e-1168.2
NC_005140:660305:675045675045675962918Vibrio vulnificus YJ016 chromosome II, complete sequenceFlp pilus assembly protein TadB9e-1167.8
NC_003888:5443832:544724354472435448193951Streptomyces coelicolor A3(2), complete genomeintegral membrane protein1e-1067.8
NC_013416:668152:680335680335681222888Aggregatibacter actinomycetemcomitans D11S-1, complete genomeTadB2e-1067
NC_015594:332432:338085338085338978894Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeType II secretion system F domain-containing protein2e-1066.6
NC_012913:167034:175954175954176838885Aggregatibacter aphrophilus NJ8700, complete genomeTadB3e-1066.2
NC_007681:1300068:132392213239221324845924Methanosphaera stadtmanae DSM 3091, complete genomeconserved hypothetical membrane-spanning protein4e-1065.9
NC_016513:974402:986595986595987260666Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeFlp pilus assembly protein TadB5e-1065.5
NC_004605:741000:756216756216757085870Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative TadB4e-0962.4
NC_018867:361423:379126379126380067942Dehalobacter sp. CF chromosome, complete genomeType II/IV secretion system protein TadC, associated with Flp pilus assembly6e-0962
NC_014931:5594946:560383056038305604822993Variovorax paradoxus EPS chromosome, complete genomeType II secretion system F domain6e-0962
NC_014387:79808:809918099181755765Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeFlp pilus assembly protein TadB8e-0961.2
NC_018691:198909:210410210410211330921Alcanivorax dieselolei B5 chromosome, complete genomeBacterial type II secretion system protein F domain protein1e-0861.2
NC_013165:2240377:226352522635252264523999Slackia heliotrinireducens DSM 20476, complete genomeFlp pilus assembly protein TadB2e-0860.1
NC_011886:2950411:297348229734822974357876Arthrobacter chlorophenolicus A6, complete genometype II secretion system protein4e-0859.3
NC_013385:759420:776509776509777318810Ammonifex degensii KC4, complete genomeType II secretion system F domain protein3e-0859.3
NC_013385:759420:788897788897789748852Ammonifex degensii KC4, complete genomeType II secretion system F domain protein5e-0858.9
NC_012778:2049694:204899420489942049701708Eubacterium eligens ATCC 27750, complete genomehypothetical protein7e-0858.5
NC_014152:397177:400594400594401553960Thermincola sp. JR, complete genomeType II secretion system F domain protein7e-0858.2
NC_021171:4549673:456038545603854561314930Bacillus sp. 1NLA3E, complete genometype II secretion system protein1e-0757.4
NC_015216:434752:4407814407814418961116Methanobacterium sp. AL-21 chromosome, complete genometype ii secretion system F domain-containing protein2e-0757
NC_002940:1065246:106436210643621065249888Haemophilus ducreyi 35000HP, complete genometight adherence protein B3e-0756.2
NC_015565:1281397:129990312999031300835933Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeType II secretion system F domain-containing protein5e-0755.5
NC_003551:659236:6690566690566701441089Methanopyrus kandleri AV19, complete genomePredicted membrane protein6e-0755.1
NC_014830:532122:547017547017547937921Intrasporangium calvum DSM 43043 chromosome, complete genomeType II secretion system F domain6e-0755.1
NC_003888:5443832:544821354482135449115903Streptomyces coelicolor A3(2), complete genomeintegral membrane protein2e-0653.9
NC_016884:813000:822248822248823177930Sulfobacillus acidophilus DSM 10332 chromosome, complete genometype II secretion system F domain-containing protein7e-0651.6
NC_015757:2844599:285508828550882856017930Sulfobacillus acidophilus TPY chromosome, complete genomeType II secretion system F domain protein7e-0651.6
NC_007333:2674596:268098926809892681810822Thermobifida fusca YX, complete genomeputative integral membrane protein8e-0651.6
NC_011769:3434744:346172334617233462703981Desulfovibrio vulgaris str. 'Miyazaki F', complete genometype II secretion system protein9e-0651.2