Pre_GI Gene

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Host: NC_011769 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011769:3434744 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3434744343671419714Fe-4S ferredoxin iron-sulfur binding domain proteinQuickGO ontologyBLASTP
34367303437710981protein of unknown function DUF362QuickGO ontologyBLASTP
34381943438523330hypothetical protein
34390553439375321hypothetical protein
343999334417981806GTP-binding protein LepAQuickGO ontologyBLASTP
34423233442919597signal peptidase IQuickGO ontologyBLASTP
34433163444026711competence protein ComM putativeQuickGO ontologyBLASTP
34440233444577555phosphatidylserinephosphatidylglycerophosphate related proteinQuickGO ontologyBLASTP
34448213445171351hypothetical protein
344516134466241464Radical SAM domain proteinQuickGO ontologyBLASTP
344661134477651155Radical SAM domain proteinQuickGO ontologyBLASTP
34477553448021267hypothetical protein
34483773449063687Resolvase domain proteinQuickGO ontologyBLASTP
34499173450681765ParB domain protein nucleaseQuickGO ontologyBLASTP
345082634525981773RecombinaseQuickGO ontologyBLASTP
34526443453618975magnesium chelatase ChlI subunitQuickGO ontologyBLASTP
34536983454342645hypothetical protein
34544343454952519hypothetical protein
345513234581553024PASPAC sensor hybrid histidine kinaseQuickGO ontologyBLASTP
34581523458640489TadE family proteinQuickGO ontology
345865934598791221von Willebrand factor type AQuickGO ontologyBLASTP
34599443460381438TadE family proteinQuickGO ontology
346051234616661155TPR repeat-containing proteinQuickGO ontologyBLASTP
34617233462703981type II secretion system proteinQuickGO ontologyBLASTP
34627173463682966type II secretion system proteinQuickGO ontologyBLASTP