Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:908000 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
908004908786783transcriptional regulator IclR familyQuickGO ontologyBLASTP
9089009102011302homogentisate 12-dioxygenaseQuickGO ontologyBLASTP
9102059114971293fumarylacetoacetaseQuickGO ontologyBLASTP
911510912142633maleylacetoacetate isomeraseQuickGO ontologyBLASTP
912136912942807hypothetical proteinBLASTP
9130689140871020GluLeuPheVal dehydrogenase dimerisation regionQuickGO ontologyBLASTP
914115914378264YebG family proteinQuickGO ontologyBLASTP
914606914890285hypothetical proteinBLASTP
914928915401474phosphate-starvation-inducible EQuickGO ontologyBLASTP
9155389167041167hypothetical protein
916712917440729hypothetical proteinBLASTP
917559918251693hypothetical protein
918998919864867hypothetical protein
919880920251372hypothetical protein
920304920969666hypothetical protein
921112921609498hypothetical protein
9222749236411368Relaxasemobilization nuclease family proteinQuickGO ontologyBLASTP
923692924060369mobilisation proteinQuickGO ontology
924117924464348hypothetical protein
9248249264701647Resolvase domainQuickGO ontologyBLASTP
926583926882300hypothetical proteinBLASTP
926886927176291hypothetical proteinBLASTP
9273529293071956hypothetical protein
9292929319372646PASPAC sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
931934932374441TadE family proteinQuickGO ontology
932444932884441peptidase A24A prepilin type IVQuickGO ontology
932900933163264hypothetical protein
933179933880702Tetratricopeptide TPR_2 repeat proteinQuickGO ontologyBLASTP
933891934778888type II secretion system proteinQuickGO ontology
934781935662882type II secretion system proteinQuickGO ontologyBLASTP
9356599369151257type II secretion system protein EQuickGO ontologyBLASTP
9369129381021191hypothetical proteinBLASTP
9380999393581260type II and III secretion system proteinQuickGO ontologyBLASTP