Pre_GI Gene

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Host: NC_007794 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007794:1553000 Novosphingobium aromaticivorans DSM 12444, complete genome

Host Lineage: Novosphingobium aromaticivorans; Novosphingobium; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: This strain, also known as F199, was isolated from a sample obtained at a depth of 410 m from a borehole sample that was drilled at the Savannah River Site in South Carolina, USA. Aromatic hydrocarbon-degrading bacterium. This organism is unusual in that it has glycosphingolipid in the cell envelope instead of the lipopolysaccharide found in most other gram negative organisms. It is typically isolated from a wide range of environmental sites.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15530481553437390hypothetical proteinBLASTP
15535141554188675two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
155418515556211437periplasmic sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
155563015575341905K potassium transporterQuickGO ontologyBLASTP
15579451558790846hypothetical protein
15590051559424420hypothetical protein
15598221560604783Flp pilus assembly CpaBQuickGO ontologyBLASTP
156059415621471554type II and III secretion system proteinQuickGO ontologyBLASTP
15621371562424288hypothetical protein
156244115640031563hypothetical protein
15640001564533534TadE-likeQuickGO ontology
15645301565159630TadE-likeQuickGO ontology
156520815664041197Flp pilus assembly protein ATPase CpaE-likeQuickGO ontologyBLASTP
156640115678041404type II secretion system protein EQuickGO ontologyBLASTP
15678091568795987type II secretion system proteinQuickGO ontologyBLASTP
15687981569766969type II secretion system proteinQuickGO ontologyBLASTP
15697711570430660TPR repeat proteinQuickGO ontology
15704511570924474peptidase A24A prepilin type IVQuickGO ontology
15709271571700774regulatory proteins IclRQuickGO ontologyBLASTP
15717751572164390transposase IS4QuickGO ontologyBLASTP
15721851572532348transposase orfA IS5 family elementQuickGO ontologyBLASTP