Pre_GI: BLASTP Hits

Some Help

Query: NC_010634:1342393:1364833 Yersinia pseudotuberculosis PB1/+, complete genome

Start: 1364833, End: 1365222, Length: 390

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:4155143:417540441754044175793390Yersinia pestis A1122 chromosome, complete genomesuccinate dehydrogenase cytochrome b556 large membrane subunit1e-68257
NC_010159:1417993:143754014375401437929390Yersinia pestis Angola, complete genomesuccinate dehydrogenase, cytochrome b556 subunit1e-68257
NC_003143:1233128:125338812533881253777390Yersinia pestis CO92, complete genomesuccinate dehydrogenase cytochrome b556 large membrane subunit1e-68257
NC_008150:650899:670124670124670513390Yersinia pestis Antiqua, complete genomesuccinate dehydrogenase cytochrome b-556 subunit1e-68257
NC_016860:816000:836807836807837211405Salmonella enterica subsp. enterica serovar Typhimurium strsuccinate dehydrogenase cytochrome b556 large membrane subunit2e-51200
NC_016832:2201860:220470022047002205104405Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Succinate dehydrogenase cytochrome b556 subunit2e-51200
NC_011094:842038:863726863726864130405Salmonella enterica subsp. enterica serovar Schwarzengrund strsuccinate dehydrogenase cytochrome b556 large membrane subunit2e-51200
NC_010102:2322866:232570623257062326110405Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-51200
NC_011080:780850:802588802588802992405Salmonella enterica subsp. enterica serovar Newport str. SL254,succinate dehydrogenase, cytochrome b556 subunit2e-51200
NC_011083:824659:846386846386846790405Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,succinate dehydrogenase, cytochrome b556 subunit2e-51200
NC_006511:2090058:209216520921652092554390Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCsuccinate dehydrogenase cytochrome b556 large membrane subunit2e-51200
NC_004631:2205821:220792822079282208317390Salmonella enterica subsp. enterica serovar Typhi Ty2, completesuccinate dehydrogenase cytochrome b556 large membrane subunit2e-51200
NC_003197:776238:797992797992798381390Salmonella typhimurium LT2, complete genomesuccinate dehydrogenase cytochrome b556 large membrane subunit2e-51200
NC_016863:776734:798488798488798877390Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1succinate dehydrogenase cytochrome b556 large membrane subunit2e-51200
NC_016857:775649:797403797403797792390Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74succinate dehydrogenase cytochrome b556 large membrane subunit2e-51200
NC_016856:776735:798489798489798878390Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssuccinate dehydrogenase cytochrome b556 large membrane subunit2e-51200
NC_016810:775649:797403797403797792390Salmonella enterica subsp. enterica serovar Typhimurium strsuccinate dehydrogenase cytochrome b-556 subunit2e-51200
NC_011147:2085241:208734820873482087737390Salmonella enterica subsp. enterica serovar Paratyphi A strsuccinate dehydrogenase cytochrome b556 large membrane subunit2e-51200
NC_003198:751779:772772772772773161390Salmonella enterica subsp. enterica serovar Typhi str. CT18,succinate dehydrogenase cytochrome b556 large membrane subunit2e-51200
NC_012779:2755338:276251727625172762906390Edwardsiella ictaluri 93-146, complete genomesuccinate dehydrogenase, cytochrome b556 subunit, putative1e-38158
NC_009092:1874888:189883018988301899225396Shewanella loihica PV-4, complete genomesuccinate dehydrogenase, cytochrome b subunit2e-33140
NC_017046:775636:797491797491797778288Salmonella enterica subsp. enterica serovar Typhimurium str. 798succinate dehydrogenase cytochrome b-556 subunit2e-32137
NC_009656:3817261:382748038274803827866387Pseudomonas aeruginosa PA7 chromosome, complete genomesuccinate dehydrogenase, cytochrome b556 subunit4e-30129
NC_009434:2006500:201956920195692019943375Pseudomonas stutzeri A1501, complete genomesuccinate dehydrogenase (C subunit)6e-26115
NC_007963:1370903:138869913886991389076378Chromohalobacter salexigens DSM 3043, complete genomesuccinate dehydrogenase, cytochrome b subunit7e-25112
NC_013861:728648:751585751585751959375Legionella longbeachae NSW150, complete genomesuccinate dehydrogenase, cytochrome b556 subunit2e-1787.8
NC_005085:1096000:111186211118621112239378Chromobacterium violaceum ATCC 12472, complete genomesuccinate dehydrogenase cytochrome b-556 subunit2e-1684.7
NC_007880:1703346:172054317205431720932390Francisella tularensis subsp. holarctica, complete genomesuccinate dehydrogenase, cytochrome b5562e-1684.3
NC_008369:1702885:172017517201751720648474Francisella tularensis subsp. holarctica OSU18, complete genomesuccinate dehydrogenase2e-1684.3
NC_010677:96470:145665145665146138474Francisella tularensis subsp. mediasiatica FSC147, complete genomesuccinate dehydrogenase, cytochrome b556 subunit2e-1684.3
NC_006570:24636:738157381574288474Francisella tularensis subsp. tularensis Schu 4, complete genomesuccinate dehydrogenase, cytochrome b5562e-1684.3
NC_008601:1733940:175118217511821751655474Francisella tularensis subsp. novicida U112, complete genomesuccinate dehydrogenase, cytochrome b5562e-1684.3
NC_008245:66852:738317383174304474Francisella tularensis subsp. tularensis FSC 198, complete genomesuccinate dehydrogenase, cytochrome b5562e-1684.3
NC_016933:66854:738337383374306474Francisella tularensis TIGB03 chromosome, complete genomeSuccinate dehydrogenase cytochrome b-556 subunit2e-1684.3
NC_016937:66854:738337383374306474Francisella tularensis subsp. tularensis TI0902 chromosome,Succinate dehydrogenase cytochrome b-556 subunit2e-1684.3
NC_009749:1699152:171644217164421716822381Francisella tularensis subsp. holarctica FTA, complete genomesuccinate dehydrogenase, cytochrome b5562e-1684
NC_009257:151737:158809158809159189381Francisella tularensis subsp. tularensis WY96-3418 chromosome,succinate dehydrogenase, cytochrome b subunit2e-1684
NC_010336:996661:104605810460581046438381Francisella philomiragia subsp. philomiragia ATCC 25017, completesuccinate dehydrogenase, cytochrome b5566e-1579.3
NC_015696:517941:567504567504567884381Francisella sp. TX077308 chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit8e-1579
NC_011662:131956:150795150795151181387Thauera sp. MZ1T, complete genomesuccinate dehydrogenase, cytochrome b556 subunit5e-1476.3
NC_015563:4773415:478154947815494781971423Delftia sp. Cs1-4 chromosome, complete genomesuccinate dehydrogenase, cytochrome b556 subunit6e-1269.3
NC_017066:140853:149938149938150312375Rickettsia typhi str. TH1527 chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit2e-1064.7
NC_017062:141270:150355150355150729375Rickettsia typhi str. B9991CWPP chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit2e-1064.7
NC_006142:140853:149938149938150312375Rickettsia typhi str. Wilmington, complete genomesuccinate dehydrogenase cytochrome b-556 subunit2e-1064.7
NC_010581:3133547:313599131359913136404414Beijerinckia indica subsp. indica ATCC 9039, complete genomesuccinate dehydrogenase, cytochrome b556 subunit4e-1063.5
NC_017057:142000:149620149620149994375Rickettsia prowazekii str. RpGvF24 chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit6e-1062.8
NC_017056:141500:149408149408149782375Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit6e-1062.8
NC_017051:140000:147603147603147977375Rickettsia prowazekii str. Dachau chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit6e-1062.8
NC_017050:141500:149398149398149772375Rickettsia prowazekii str. Katsinyian chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit6e-1062.8
NC_017049:140000:147599147599147973375Rickettsia prowazekii str. Chernikova chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit6e-1062.8
NC_017048:484000:491564491564491938375Rickettsia prowazekii str. GvV257 chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit6e-1062.8
NC_000963:141500:149400149400149774375Rickettsia prowazekii str. Madrid E, complete genomeSUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT (sdhC)6e-1062.8
NC_019907:819165:837669837669838064396Liberibacter crescens BT-1 chromosome, complete genomeSuccinate dehydrogenase cytochrome b-556 subunit1e-0962
NC_009881:166500:173782173782174156375Rickettsia akari str. Hartford, complete genomesuccinate dehydrogenase cytochrome b-556 subunit1e-0962
NC_015740:1845370:185731218573121857572261Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completesuccinate dehydrogenase subunit C5e-0960.1
NC_010263:167450:170033170033170407375Rickettsia rickettsii str. Iowa, complete genomesuccinate dehydrogenase cytochrome b556 subunit5e-0960.1
NC_009882:167350:169940169940170314375Rickettsia rickettsii str. 'Sheila Smith', complete genomesuccinate dehydrogenase cytochrome b-556 subunit5e-0960.1
NC_016908:167423:170013170013170387375Rickettsia rickettsii str. Colombia chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit5e-0960.1
NC_016911:167398:169981169981170355375Rickettsia rickettsii str. Hauke chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit5e-0960.1
NC_016914:167537:170120170120170494375Rickettsia rickettsii str. Hino chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit5e-0960.1
NC_016915:162841:170206170206170580375Rickettsia rickettsii str. Hlp#2 chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit5e-0960.1
NC_016930:165376:167974167974168348375Rickettsia philipii str. 364D chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit5e-0960.1
NC_009879:141000:147799147799148173375Rickettsia canadensis str. McKiel, complete genomeSuccinate dehydrogenase cytochrome b-556 subunit4e-0960.1
NC_016929:141972:148764148764149138375Rickettsia canadensis str. CA410 chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit5e-0959.7
NC_003103:164972:167594167594167968375Rickettsia conorii str. Malish 7, complete genomesuccinate dehydrogenase cytochrome b-556 subunit [EC:1.3.99.1]5e-0959.7
NC_012559:2309566:231265023126502313024375Laribacter hongkongensis HLHK9, complete genomeSdhC9e-0958.9
NC_014914:1678973:167934716793471679760414Taylorella equigenitalis MCE9 chromosome, complete genomeSuccinate dehydrogenase cytochrome b-556 subunit8e-0958.9
NC_010678:642769:659967659967660443477Ralstonia pickettii 12J chromosome 2, complete sequencesuccinate dehydrogenase, cytochrome b556 subunit1e-0858.5
NC_018643:1:107031070311086384Alpha proteobacterium HIMB5 chromosome, complete genomesuccinate dehydrogenase subunit C1e-0755.1
NC_014910:2015627:202857420285742029005432Alicycliphilus denitrificans BC chromosome, complete genomesuccinate dehydrogenase, cytochrome b556 subunit2e-0754.7
NC_009883:277409:280019280019280396378Rickettsia bellii OSU 85-389, complete genomeSuccinate dehydrogenase cytochrome b-556 subunit7e-0752.8