Pre_GI Gene

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Host: NC_016929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016929:141972 Rickettsia canadensis str. CA410 chromosome, complete genome

Host Lineage: Rickettsia canadensis; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: Members of this genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, are obligate intracellular pathogens. In both groups, the bacteria are transmitted via an insect, usually a tick, to a host organism where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. This organism was originally thought to be a member of the typhus group of Rickettsiales, however, it is now thought to represent a distict group with the rickettsia.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1419721430601089putative nucleoside-diphosphate-sugar epimeraseQuickGO ontologyBLASTP
1430571441631107Mrp proteinQuickGO ontologyBLASTP
1442641453041041protease activity modulator HflKQuickGO ontologyBLASTP
145482146342861hflc protein hflcQuickGO ontologyBLASTP
1463631478981536Holliday junction resolvaseQuickGO ontologyBLASTP
147993148742750hypothetical proteinBLASTP
148764149138375succinate dehydrogenase cytochrome b-556 subunitQuickGO ontologyBLASTP
14950514959793hypothetical proteinBLASTP
149976150353378succinate dehydrogenase hydrophobic membrane anchor proteinQuickGO ontologyBLASTP
1505571523471791succinate dehydrogenase flavoprotein subunitQuickGO ontologyBLASTP
152556153212657succinate dehydrogenase flavoprotein subunitQuickGO ontologyBLASTP
15337015375939030S ribosomal protein S12QuickGO ontologyBLASTP
15378615426848330S ribosomal protein S7QuickGO ontologyBLASTP
1542811563532073elongation factor GQuickGO ontologyBLASTP
15651415658976tRNA-TrpQuickGO ontologyBLASTP
156782156982201preprotein translocase subunit SecEQuickGO ontologyBLASTP
156998157576579transcription antitermination protein NusGQuickGO ontologyBLASTP
15781015824743850S ribosomal protein L11QuickGO ontologyBLASTP
15825315897272050S ribosomal protein L1QuickGO ontologyBLASTP
15925715976651050S ribosomal protein L10QuickGO ontologyBLASTP
15979816017537850S ribosomal protein L7L12QuickGO ontologyBLASTP
1608771649984122DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
1651921693254134DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP