Pre_GI Gene

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Host: NC_000963 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000963:141500 Rickettsia prowazekii str. Madrid E, complete genome

Host Lineage: Rickettsia prowazekii; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This strain is an egg-passaged attentuated avirulent strain that has been used as a live vaccine and was originally isolated from a typhus patient in Madrid. This species is the causal agent of typhus. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1426851437491065hypothetical proteinBLASTP
143749144705957hypothetical proteinBLASTP
1448041458381035HFLK PROTEIN hflKQuickGO ontologyBLASTP
145982146842861HFLC PROTEIN hflCQuickGO ontologyBLASTP
1468731484141542PROBABLE PERIPLASMIC SERINE PROTEASE DO-LIKE PRECURSOR htrAQuickGO ontologyBLASTP
148519149262744hypothetical proteinBLASTP
149400149774375SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT sdhCQuickGO ontologyBLASTP
149933150310378SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR PROTEIN sdhDQuickGO ontologyBLASTP
1504441522341791succinate dehydrogenaseQuickGO ontologyBLASTP
152354153010657PUTATIVE GLUTAMINE TRANSPORT SYSTEM PERMEASE PROTEIN GLNP glnPQuickGO ontologyBLASTP
15317215356139030S ribosomal protein S12QuickGO ontologyBLASTP
15359515407748330S ribosomal protein S7QuickGO ontologyBLASTP
1540891561882100elongation factor EF-2QuickGO ontologyBLASTP
15633115640373
156550156750201translocaseQuickGO ontologyBLASTP
156766157344579transcription antitermination protein NusGQuickGO ontologyBLASTP
15747715791443850S ribosomal protein L11QuickGO ontologyBLASTP
15791715863371750S ribosomal protein L1QuickGO ontologyBLASTP
15872115923051050S ribosomal protein L10QuickGO ontologyBLASTP
15941915979637850S ribosomal protein L7L12QuickGO ontologyBLASTP
1606501647744125DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
1649311690494119DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP