Pre_GI Gene

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Host: NC_017062 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017062:141270 Rickettsia typhi str. B9991CWPP chromosome, complete genome

Host Lineage: Rickettsia typhi; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, is composed of obligate intracellular pathogens. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host. This organism causes murine typhus and is an obligate intracellular pathogen that infects both the flea vector and hosts such as human, rat, and mouse. R. prowazekii, and genomic comparisons demonstrate colinearity and similarity to the genome of that organism except for two independent inversions near the origin and terminus. In the flea vector, the bacterium penetrates the gut epithelial barrier and is found in the feces which become infective.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
141270141773504F0F1 ATP synthase subunit BQuickGO ontologyBLASTP
1436321446961065putative nucleoside-diphosphate-sugar epimeraseQuickGO ontologyBLASTP
144696145652957ATP-binding protein MrpQuickGO ontologyBLASTP
1457531467871035protease activity modulator protein HflKQuickGO ontologyBLASTP
146939147799861protease activity modulator protein HflCQuickGO ontologyBLASTP
1478151493711557serine proteaseQuickGO ontologyBLASTP
149470150213744hypothetical proteinBLASTP
150355150729375succinate dehydrogenase cytochrome b-556 subunitQuickGO ontologyBLASTP
150887151264378succinate dehydrogenase hydrophobic membrane anchor proteinQuickGO ontologyBLASTP
1514041531941791succinate dehydrogenase flavoprotein subunitQuickGO ontologyBLASTP
153330153986657glutamine transport system permease protein GlnPQuickGO ontologyBLASTP
15414715453639030S ribosomal protein S12QuickGO ontologyBLASTP
15456915505148330S ribosomal protein S7QuickGO ontologyBLASTP
1550641571632100elongation factor GQuickGO ontologyBLASTP
15730715738276tRNA-TrpQuickGO ontologyBLASTP
157550157750201preprotein translocase subunit SecEQuickGO ontologyBLASTP
157766158344579transcription antitermination protein NusGQuickGO ontologyBLASTP
15852215895943850S ribosomal protein L11QuickGO ontologyBLASTP
15896215967571450S ribosomal protein L1QuickGO ontologyBLASTP
15976516027451050S ribosomal protein L10QuickGO ontologyBLASTP
16045516083237850S ribosomal protein L7L12QuickGO ontologyBLASTP
1616571657814125DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
1660831702014119DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
1712341727361503multifunctional aminopeptidase AQuickGO ontologyBLASTP
172831173625795hypothetical proteinBLASTP
173727174161435hypothetical proteinBLASTP
1742331760501818aspartyl-tRNA synthetaseQuickGO ontologyBLASTP
1763041784272124hypothetical proteinBLASTP
178527179237711hypothetical proteinBLASTP
179438180157720dihydrodipicolinate reductaseQuickGO ontologyBLASTP
180420180905486hypothetical proteinBLASTP
180890181615726glutamine-binding periplasmic protein GlnHQuickGO ontologyBLASTP
1817801832311452aspartylglutamyl-tRNA amidotransferase subunit BQuickGO ontologyBLASTP
1833861848671482aspartylglutamyl-tRNA amidotransferase subunit AQuickGO ontologyBLASTP